Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_0601
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Entry
PSPPH_0601 CDS
T00266
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSPPH_0601 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_0601 (xseB)
Enzymes [BR:
psp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PSPPH_0601 (xseB)
DNA repair and recombination proteins [BR:
psp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PSPPH_0601 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
FH2
Motif
Other DBs
NCBI-ProteinID:
AAZ36864
UniProt:
Q48NW8
LinkDB
All DBs
Position
complement(711513..711851)
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AA seq
112 aa
AA seq
DB search
MLPLHCSVAVICPEALALLVSRGLTSTGNAPMARKKAALDFEQSLADLQALVERLENGEL
SLEDSLTAFEQGVRLTRDCQSALTQAEQKVQVLLERDGELSEEPFDDAELPE
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcccttgcattgctccgtcgccgttatttgcccagaagccctcgctctgctagtg
tcgcgcggtttaacctctaccggaaatgcccccatggcccgcaagaaagctgcactggat
ttcgaacagtcactcgctgacctgcaagcgctggtagagcggctggagaatggcgagttg
tctctggaagactccctgaccgccttcgagcaaggtgtacgcctgacccgcgactgccaa
agcgcccttacccaggccgaacagaaggtccaggtgctgctggagcgcgatggcgaactg
agcgaagagccgttcgacgatgcggaacttcccgaatga
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