Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_0695
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Entry
PSPPH_0695 CDS
T00266
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPPH_0695 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_0695 (recB)
Enzymes [BR:
psp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSPPH_0695 (recB)
DNA repair and recombination proteins [BR:
psp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPPH_0695 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AAZ35357
UniProt:
Q48NN1
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All DBs
Position
812921..816613
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AA seq
1230 aa
AA seq
DB search
MNKQSLPLALRFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGTEHSGFGRELLPPQIL
VVTFTDAATKELRDRIRTRLAEAARFFRDEIAAPDGLIAELREQFEAEQWPACASRLDIA
AQWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRRFCYPMSG
DALTWVRENLSGPAALLPRVRGLFGRGRSPLTQEPAELIEASLQERRAALAALKGPWAAW
AEELYVLCQDAVARKVVDGRKMQERYFKPWFEKLAAWAADDTQEALDLGTGFTRLTPEGV
AEAWKSDPPSLPAFEAMAQLKAALDSLPKPDAAVLQHAAQWVSARFEEEKRRRAEMGFDD
MLLRLDAALHSAGGERLATLIREQFPVALIDEFQDTDPVQYRIFDSIYRLEGNDEQTGLF
LIGDPKQAIYAFRGADIYTYLRARQATDGRWHTLDTNYRSSHAMVASVNHVFRRAEQRTQ
GRGAFLFRNDQSNQVPFSDALAQGRKETLEVDGAPLTALTVWHLESEQPVSGVIYRQQLA
ASCASEIVRLLNAGQQGRAGFAMLDKPLRGLRPADIAILVRDGKEAQAVRQQLSARGVRS
VYLSDKDSVFAAQEAHDLLSWLKACAEPDSERTLRAALACITLDLPLAELERLNQDELAW
ERRVMQFRGYRAVWRSQGVLPMLRRLLHDFALPQTLMTRTDGERVLTNLLHLSELLQQAA
AELDGEQALIRHLGDHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLQYPLVFLPFIC
SSKPVDGSRLPLQFHDADGNSQISLQPTEALIQQADDERLAEDLRLLYVALTRSEHACWL
GVADLKRGNASNSMLHRSALGYLLGGGVALAESAELKVWLRDLAQGCDAIALQPVPEPTD
ERFNAPRNEAALVKLLVPKRRAAENWWIASYSALRIGDTVTTGADESPDSPQAQKLFDDE
RLDPEAPRDILTSGGDIHRFPRGPNPGTFLHGLLEWAGNEGFAVTAHAPDKLQDAVARRC
NRRDWAGWINTLSDWLQHMLNMPLRLSPDATPVALGELDQPNQYRIEMEFWFASNNVNVA
QMDALVRRFTHNNAPRAATETVSLNGMFKGFIDLTFEHEGRYYVADYKSNWLGTDDTAYT
ELAMETAILDNRYDLQYVLYLLALHRQLKARMADYDYDQHMGGALYLFLRGSRSVSQGAY
FVRPPRELIESLDLLFQGKPLAHDLPGALA
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaatcccttcctctggcgctgcgctttccactacgcggcagtcaactgatc
gaggccagcgccgggaccggcaagaccttcaccatctccgccctgtacttgcgcctggtg
cttgggcacggcaccgaacactcaggctttggtcgtgaattgctgccgccgcagatcctc
gtggtgacctttaccgacgccgctaccaaggagctgcgtgacaggattcgtacccgattg
gcggaagctgcgcggttctttcgtgacgagattgccgcacctgacggtttgattgccgag
ctgcgcgagcagttcgaggccgagcagtggccggcctgtgccagccgtctggacatcgcc
gcacagtggatggacgaagccgccgtctcgacgatccacagctggtgccagcgcatgttg
cgcgagcacgcattcgacagcggcagcctgttcacccagaccctggaaaccgaccacagc
gatttgctcggtgaagtgctgcgcgactactggcgccgcttctgctaccccatgagcggc
gacgcgttgacctgggtgcgggaaaatctgagcggtccggcggcgttgttgccgcgtgtg
cgaggtttgtttggtcgtggtcgcagcccgctcactcaagagcccgccgaactgatcgag
gcgtcattgcaggagcgccgagcagcgctcgctgccctgaaagggccttgggccgcctgg
gctgaagagctgtatgtgctctgtcaggacgccgtagcccgcaaagtggtcgatggccgc
aagatgcaggagcgctacttcaagccctggtttgaaaagcttgccgcatgggccgctgac
gacacacaggaagcgttggatctgggtaccggtttcacgcgcctgaccccggagggtgtt
gccgaggcctggaaaagtgatccgccttcactccccgctttcgaggccatggcacagctg
aaagctgcgctggacagcctgcccaagccggatgccgcggtgttgcagcatgcggcgcag
tgggtaagcgcccgctttgaagaagagaagcggcgccgtgccgagatggggtttgacgac
atgctgcttaggctcgatgccgccctgcacagcgctggcggcgaacgtctggccaccctg
attcgtgagcagtttccggtagcgttgatcgatgagtttcaggacaccgacccggtgcag
taccggatcttcgacagcatctatcgccttgagggtaacgacgagcagaccgggctgttc
ctgatcggcgacccgaagcaggcgatctatgcgtttcgcggtgccgatatctatacgtac
ctgcgcgcccggcaggccaccgatggccgttggcacacgctggacaccaactaccgctcc
agccatgcaatggtcgcgtcggtcaaccatgtcttcaggcgcgcagaacaacgtacacaa
ggtcgcggagcgttcctgtttcgtaatgatcaaagcaatcaggtgccgttctccgatgcg
ctggcccaggggcgcaaagagaccctggaagtcgacggcgcgccactgactgcactcacg
gtctggcatcttgaaagcgaacagccggtgtccggggttatttatcgccaacagttggcg
gccagttgcgccagcgagatcgtgcgcctgctcaacgccggtcagcagggccgtgccggt
ttcgccatgcttgataaaccgctgcgcgggctgcgtccggccgacattgcgattctggtc
cgcgacggcaaggaagcgcaggcggtgcgtcagcaactcagtgcgcgtggcgtgcgcagc
gtttatctgtcggacaaggactcagtgttcgccgctcaggaagcccacgacctgttgtcc
tggctcaaagcctgtgccgaacccgattccgaacgtacgctgcgtgccgcgttggcttgt
atcacgctggacctgccgctggccgagctggagcgtctgaatcaggacgaactggcgtgg
gaacggcgcgtcatgcagttccgtggctatcgtgccgtgtggcgcagccagggcgtcctg
ccaatgctgcgccgcctgctacacgactttgccctgccgcagacattaatgacgcgcacc
gacggtgagcgagtactgaccaacctgttgcacttgtctgaactgctgcagcaggccgcc
gccgaacttgacggcgaacaggccttgattcggcatctgggcgaccacctggcactgtcc
ggtcaggctggcgaagaacagattttgcgtctggaaagcgacgagcaactggtcaaggtg
gtgaccatccacaagtccaagggcctgcaatatccgctggtgttcctgccattcatttgc
tcctcgaaacccgtggacggcagtcgcctgccactgcagtttcatgacgccgacggcaac
tcgcagatcagcctgcagcccaccgaagcgctgattcagcaagccgatgacgaacgtctg
gccgaagacctgcgcttgctctacgtggcgctgacccgttccgaacacgcttgctggctg
ggcgttgccgacctcaaacgcggcaatgccagcaactcgatgctgcaccgttcggcgttg
ggttatttgctgggtggcggtgttgcgctggccgagtcggcagagctgaaagtctggctg
cgtgatctcgcgcaaggctgtgatgcgattgccttgcagcctgttcccgagcccactgac
gaacgcttcaatgcgccgcgcaacgaagccgcgctggtcaaactgctggtacccaaacgt
cgcgctgccgagaactggtggatcgcctcctacagcgccctgcgtatcggcgacaccgta
accaccggtgccgatgaatcgcctgacagtccgcaggcacagaagctgttcgacgacgag
cgcctggaccctgaagcgccgcgtgacattttgaccagcggcggcgatatccaccgcttt
ccgcgtggccccaatcccggcacctttctgcatggactgcttgagtgggctggcaacgaa
ggttttgcggtgaccgctcacgcgccggacaaactgcaggacgccgttgcccggcgctgc
aatcggcgcgattgggcgggctggatcaataccctgagcgattggctgcagcacatgctg
aacatgccgttgcgtctgtcgccggatgccacaccggtcgcgctgggtgagctggaccag
cccaatcagtaccgcatagagatggaattctggttcgccagcaacaacgtcaatgtggcg
cagatggacgctcttgtgcgccgcttcacccacaacaacgcgccgcgtgctgcgaccgaa
acggtctcgctcaacggcatgttcaaaggctttatcgacctgacgttcgaacacgaaggc
cgttattacgtggctgactacaagtccaactggctgggcaccgacgacactgcgtacacc
gaactggcgatggaaaccgccattctcgacaaccgctacgacctgcaatacgtcctgtac
ttgctggcgttgcatcgtcagctcaaggcacggatggccgactatgattacgaccagcac
atgggcggtgcgctgtatctgttcctgcgcggcagccgttcggtctctcagggcgcgtat
ttcgtccgtccaccacgcgaactgatagagagtctggaccttttgtttcagggtaaaccg
ttagcgcatgacctgccgggagcattggcatga
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