Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_1010
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Entry
PSPPH_1010 CDS
T00266
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_1010 (phrB)
Enzymes [BR:
psp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSPPH_1010 (phrB)
DNA repair and recombination proteins [BR:
psp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSPPH_1010 (phrB)
Prokaryotic type
PSPPH_1010 (phrB)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
DUF3243
Motif
Other DBs
NCBI-ProteinID:
AAZ33198
UniProt:
Q48MU1
LinkDB
All DBs
Position
complement(1200846..1202294)
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AA seq
482 aa
AA seq
DB search
MQLIWLRSDLRVHDNTALTAAMERGPTLAVYLLSPAQWRSHDDADCKVDFWLRNLVELEK
ALGALNVPLLIREADTWDQAPEVLSTLCTQLKIEGLHLNQEYGINETRRDQAVQKALEKA
GVQVTSYLDQLLFKPGSILTKTGNYFQVFTQFKKVCYNRMHQAMPQPVRTPKAQQSLSIK
SDSIPDQVEGFATPSKALRDLWPAGEAEARRRMATFADAQISYYKTERDFPAKPGTSQLS
AYLAAGVISPRQCLHAALGSNQGEFETGDVGTVTWINELLWREFYKHTLVGYPRVSRHRA
FRPETEALKWRDAPEELLAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWHEGERFFMRHLIDGDLASNNGGWQWSSSTGTDSAPYFRIFNPLSQSERFDPEGVFIK
RWLPELADLNKKQIHDPASIGGLFGAADYPKPIVDLSKSRARALAAFKALPARQPAAGIE
HD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgtagcgacctgcgcgttcacgataataccgccctgaccgct
gccatggagcgcggtccgacgctggcggtttacctgctcagcccggcacagtggcgcagc
cacgacgatgctgactgcaaggtggatttctggctgcgtaatctggtcgagctggaaaag
gcactgggcgcgctgaacgtaccgctgttgattcgcgaggccgatacttgggatcaggca
cctgaagtgctgtcgacactgtgcacgcagctcaagatcgaaggcctgcacctcaatcag
gaatacggcatcaacgaaacacgccgtgatcaggcggtgcaaaaggcgctggaaaaagcc
ggtgtgcaggtcaccagttaccttgatcagctgttgttcaagccgggcagcatactgacc
aagaccggcaattatttccaggtgttcactcagttcaagaaagtctgctacaaccggatg
caccaggccatgccgcagccggtgcgcacacccaaagcgcagcaatcactgtcgatcaag
agcgattcgatccctgatcaggtcgagggctttgctacgccctcgaaagcattacgtgac
ctgtggccagcaggcgaggccgaagccaggcggcgcatggcgaccttcgccgacgcgcaa
atcagttactacaagaccgaacgcgactttcccgccaaacccggcaccagtcagctgtca
gcgtatctggcggcaggggtgatttcgccgcgccagtgcctgcatgcggcgctgggcagc
aaccagggggaattcgagaccggcgacgttggcactgtgacctggatcaacgagctatta
tggcgagagttttataaacacacgctggtcggctaccctcgtgtatcacggcatcgtgcc
ttccgcccggaaaccgaggcgttgaagtggcgcgatgcccccgaagaactgctggcgtgg
caagaggcgcgtaccggtctgccgattattgacgcagcgatgcgccagttgctggaaacc
ggatggatgcacaatcggctaaggatggtcgttgcgatgttcctcaccaaaaacctgttg
atcgactggcacgagggcgagcgctttttcatgcgccacctgatcgacggcgacctggcg
tcgaacaatggtggctggcagtggagctcgtccaccggcaccgactcggcgccctacttc
cgtattttcaatccgttgtcgcagtcggaacgcttcgacccagaaggcgtgttcatcaaa
cgctggctgccagagctcgccgatctgaataaaaagcagattcatgaccccgcgtccatc
ggcggcctgtttggcgctgccgactacccgaaacctatcgtcgatctgagcaaaagccgc
gcccgcgccctggcagcattcaaggcgcttccggcccgccaacccgctgcgggaatcgaa
catgactga
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