Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_1340
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Entry
PSPPH_1340 CDS
T00266
Name
(GenBank) periplasmic binding domain/transglycosylase SLT domain fusion protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psp01011
]
PSPPH_1340
Enzymes [BR:
psp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSPPH_1340
Peptidoglycan biosynthesis and degradation proteins [BR:
psp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSPPH_1340
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
NMT1
Motif
Other DBs
NCBI-ProteinID:
AAZ33714
UniProt:
Q48LX4
LinkDB
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Position
complement(1555417..1557096)
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AA seq
559 aa
AA seq
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MCFEAAHSSLKRAFDHPKRRHRVRPNVAPRKKSLKMPVKPPRLSDAGFTVEIWRPVRFAY
TAPMFFRPDFRPRCAKWLIATGLFLMLGACVEKPTTLERVKEDGVLRMITRNSPATYFQD
RNGETGFEYELVKRFADDLGVELKIETADNLDDLFDQMNKPGGPVLGAAGLIETPKRKQQ
ARFSHSYLEVTPQVVYRNGQSRPTDPGDLVGKRIVVLKGSAHAEQLAALKAQNPGLEYEE
SDAVEVVDLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGEAREQRWVVAPGEDN
SLLNEINAYLDKVEKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQERLPKYEKHFQTSA
KKEQVDWRLLAAIGYQESMWQPAVTSKTGVRGLMMLTQNTAQAMGVTNRLDARQSIQGGA
KYFAYVKDQLDDSIKEPDRTWLALASYNIGSGHLEDARKLAQNEGLNPDKWLDVKKMLPR
LAQKKWYSKTRYGYARGGEPVHFVANIRRYYDILTWVTQPQLEGSQVADGNLHVPGVDKT
QPPAPPAPASGSSPDKPAL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgtgctttgaggccgcacattctagcctaaagcgggcctttgatcacccaaaacggcgg
catcgggtgcgcccgaatgtcgctccacgcaaaaaaagtctgaaaatgcctgtaaaaccc
cctcgcctatcagacgcaggcttcactgtcgagatatggcgcccggtgcgctttgcgtat
actgcaccgatgttcttcagaccagatttccgcccacgttgcgccaagtggctcatcgca
accggactcttcctgatgctcggcgcctgtgtggagaaacccaccacactggagcgagtc
aaggaggacggcgtgctgcggatgatcacccgtaacagcccggcgacttattttcaggat
cgcaacggcgaaacaggcttcgaatacgagctggtcaagcgtttcgccgatgatctgggc
gtcgaactgaagatcgaaacggccgacaatctggacgatctgttcgaccagatgaacaaa
ccgggcggtccggtcctgggtgctgcgggcctgatcgagacgccaaagcgcaagcaacag
gcgcgtttctcgcactcttatctggaagtgacccctcaggttgtctaccgcaacggccag
tcacgtcccaccgacccgggcgacctggtgggtaaacgtatcgtggtcctgaaaggtagc
gcgcatgccgagcagcttgcggcactcaaggcgcagaatcccggccttgaatatgaagag
tcggatgcggtcgaggtcgtcgatctcctgcgtatggtcgatgaaggccagattgacctg
acgctggtcgactccaacgagctggcgatgaaccaggtgtactttcccaacgtgcgtgta
gccttcgacctgggcgaagcccgcgaacaacgctgggtggttgcaccgggcgaagacaac
agcctgctcaacgaaatcaacgcgtacctcgacaaggtcgagaagaacggcacgctgcaa
cgtctgaaagaccgttactacggccacgtcgatgtacttggctacgttggcgcctatacc
tttgcccagcatttgcaggaacgcctgcccaaatacgagaaacactttcagacatcggcc
aagaaagaacaggtcgactggagattgctggccgccatcggctatcaggaatcaatgtgg
caaccggccgttacctcgaaaaccggtgtgcgcggcctgatgatgctgactcagaacacc
gctcaggcgatgggcgtgaccaacaggctcgacgcgcgacaaagcattcagggcggcgca
aagtattttgcctacgtaaaggatcagctggacgactcgattaaagagccagatcgcact
tggctagctctcgcgtcctacaacattggcagcggtcacctcgaagatgcgcgcaaattg
gcccagaacgaggggctgaatcctgataaatggctggacgtgaaaaaaatgctgccgcgt
ctggcgcagaagaagtggtacagcaaaacgcgttacggctacgcccgaggcggcgagcct
gtgcatttcgttgccaacattcgtcgttattacgacattctgacctgggtcacgcagcct
cagctcgagggcagccaggtcgccgatggcaacctgcatgttcccggtgtcgacaagacc
caaccacctgcgccgcctgcacctgcttcaggcagtagccccgacaagcctgcgctctag
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