Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_1462
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Entry
PSPPH_1462 CDS
T00266
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psp03009
]
PSPPH_1462 (srmB)
Enzymes [BR:
psp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSPPH_1462 (srmB)
Ribosome biogenesis [BR:
psp03009
]
Prokaryotic type
rRNA helicases
PSPPH_1462 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AAZ36720
UniProt:
Q48LK7
LinkDB
All DBs
Position
1705008..1706345
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AA seq
445 aa
AA seq
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MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRK
VPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM
LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLAN
ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVAT
DVAARGLDVEGLDMVINFDMPRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVER
YLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKGPTKRKTVNR
PKSDLVSQDGMAPLKKRSTPAPAAE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgttttccgaattcgccctgcacgaacgcctgcttaaagctgtggccgagcttaaattt
gtcgagcctacgcctgtgcaggcggccgccattccgctcgcacttcaagggcgtgacctg
cgggtgacagcgcaaaccggtagcggcaagaccgcggcatttgtgctgccgatcctcaac
cgtctgatcggcccggccaaggttcgtgtcgacatccgtgcggtgatcctgctgccgacc
cgtgagctggctcagcagacgctcaaggaagtcgagcgcttctcgcagttcactttcgtc
aaggccggtttgatcactggtggtgaggacttcaaggttcaggccgcgatgctgcgcaag
gtgccggacattctgatcggcacgccggggcgtctgctggagcagttgaacgctggcaac
ctggacctcaagcacgttgaagtgctggtgctggacgaagccgaccgcatgctggacatg
ggcttctctgaagacgtcgagcgtctggcaggcgaatgtgccggtcgcgagcagaccatg
ctgttctccgcaaccaccggtggtgccggcctgcgtgaaatgatcggcaaggtgctcaag
gatccacagcatctgcaagtgaacagcgtcagcgagctggcttccggcacacgccaccag
atcatcaccgccgaccacaatgtgcacaaagagcaggtgctgaactggctgctggccaac
gagacttaccagaaagccattatcttcaccaataccaaggctatggccgatcggttgtac
ggccgtctggtggcgctggaatacaaggcgttcgtgctgcacggcgacaaggaccagaag
gaccgtaaggcggccatcgaccgtcttaagcagggcggtgccaagatcatggtcgcgacc
gatgtggcggctcgcggtcttgatgttgaaggtctggacatggtgatcaacttcgacatg
ccgcgcagcggtgacgattacgtccaccgcgtcggtcgtaccggccgtgcgggtagcgac
ggtctggcgatctcgctgatctgtcatggcgactggaacctgatgtcgagcgtcgagcgc
tacctcaagcagagctttgagcgtcgtgtcatcaaggaagtcaaaggcacctacggcggg
ccgaagaaggtcaaggcatcgggcaaggctgtaggcgtgaagaagaaaaagactgacgcc
aagggcgacaagaaaaagacagcggccaaggggccgaccaagcgcaagacggtcaaccgt
cccaagtccgatctggtcagccaggacggcatggcgccgctgaaaaaacgcagcaccccg
gccccggctgccgagtga
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