Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_1518
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Entry
PSPPH_1518 CDS
T00266
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPPH_1518 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psp03019
]
PSPPH_1518 (recQ)
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_1518 (recQ)
Enzymes [BR:
psp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSPPH_1518 (recQ)
Messenger RNA biogenesis [BR:
psp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSPPH_1518 (recQ)
DNA repair and recombination proteins [BR:
psp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSPPH_1518 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Sigma70_r4_2
GerE
HTH_23
HTH_29
DnaD_N
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AAZ37118
UniProt:
Q48LF2
LinkDB
All DBs
Position
1764415..1766544
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AA seq
709 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVANGGDALVLMPTGGGKSLCFQVPGLLREGLC
VVVSPLIALMDDQVATLDELGVSAAALNSTLSAEQQRELANRIRLGEVKMLYLAPERLVQ
PRMLSFLQNLQIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPDVPRIALTATADKRT
REEIVTRLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAVFLSENGYPALPYHAGLPSETRAANQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLMLKQMLQNSEGDERHKRLEQHK
LDAMLALCEETRCRRQTLLAYFDEDMPNPCGHCDNCVDGVQTWDATEPARQALSAIYRTG
QRYGVGHLVDVLLGKSNDKVESFGHQHLSVFGVGKARTEAEWRSLFRQLVARGLADIDLE
GYGGLRLSDTCRPLLRGEVTLELRRDLKPQTTSKSSSGSPASQLVRGEEREQWEALRALR
RKLAEEHAVPPYVIFPDSTLLEMLRSKPGSMAEMARVGGVGARKLERYGEAFLEVLSGKA
EAPRVVADVRHELISLARAGMTPTQIAGQLQCSEKNVYTLLAEAIGKQQLSIEQALDLPE
DLLGEVQDAFLDGEGELPPVSAIAEQFAGRVPEGVLYCVRAALQSEFEV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagcaggcacaacgcgtacttaaagacatcttcggttacgacagctttcgtggt
cgccagggtgccattatcgagcgtgtagccaacggtggcgatgcactggtgctgatgccg
accggtggtggcaagtccctgtgttttcaggtgccagggctgttgcgtgaggggctctgt
gtggtcgtctcgccgctcattgcgctgatggacgatcaggtcgccacgctggatgaactc
ggtgtgtccgctgctgcgctcaactccaccctcagtgccgagcaacagcgtgagctggcc
aaccgcattcgcctgggcgaagtcaaaatgctctacctcgctccggagcgcctggttcag
ccgcgcatgctgtcgttcctgcaaaatcttcaaattgccctgtttgccattgatgaagcg
cactgcgtatcgcaatggggtcatgatttccgccctgagtacctgcaattggggcaactg
gccgagctgtttccggatgtgccgcgcatcgcgctgaccgccaccgccgacaagcgtacc
cgcgaagaaatcgtcacgcgcctgcacctgcagaacgccgagcgctttctgtccagcttc
gaccggccaaacatcttctatcgcatcgtgcccaaggaacagccgcgcaaacagctgctg
gcgttcctctccgaacggcgcagcgatgctggcattgtctactgcctgtcgcgcaagaaa
gtcgatgaagtggccgtatttctgagcgaaaacggctatcccgcgctgccgtatcacgcc
gggctgccctcggaaacccgtgctgccaaccagaaacgcttccttaatgaggaagggctg
atcatggtggcgaccatcgcgttcggcatgggcatcgacaaacccaacgtgcgttttgtg
gcgcacatggacctgcccaaatcgcttgaggcctactatcaggaaaccggccgggccggg
cgtgatggcctgcctgccgatgcctggatggcctacggtctgcaagacgtgctgatgctc
aagcagatgttgcagaactccgaaggcgacgagcgccataagcgtctggagcagcacaag
ctcgacgccatgctcgccctgtgcgaagaaacccgttgccgccgacagaccctgctggcc
tatttcgacgaagacatgcccaacccgtgcgggcattgcgacaactgcgtcgatggcgtg
cagacctgggatgccaccgaacctgcgcgtcaggcgctgtcggccatctaccgtaccggc
cagcgttatggcgtcggtcatctggtcgatgtgctgctgggcaaatccaacgacaaggta
gaaagcttcggccatcagcatctgtcggtgttcggggtcggcaaggcacgcaccgaggcc
gagtggcgctcgctgttccgccaactggtggcgcgcgggctggcagacatcgaccttgaa
ggctatggcggcctgcgcttgagcgacacgtgccggcctctgctgcgtggcgaagttact
ctggaactgcgccgcgacctcaagccacaaaccacttcaaagagcagttccggcagcccg
gcgagccagctggtgcgcggcgaagagcgcgagcagtgggaggccttgcgtgccttgcgg
cgcaagctggccgaggaacatgccgtgccgccttacgtcattttcccggactcgaccctg
ctggaaatgctgcgcagcaaacccggatcaatggccgagatggcccgagtgggcggcgtg
ggcgcgcgcaagctggagcgttacggcgaggcttttcttgaagtgctcagtggcaaggcc
gaggcaccacgggtggtggccgatgtacgtcacgagctgatcagcctggcgcgtgccggt
atgacccccacgcagattgccggtcagttgcagtgctcggaaaagaatgtctacaccctg
ttggccgaggccatcggcaagcagcagctgtccatcgagcaggcactggacttaccggaa
gacctgttgggcgaggttcaggatgcctttctcgatggtgaaggagaactaccaccggtg
tcggcgattgccgagcaatttgccgggcgggtgccggagggcgttttgtattgcgtgcga
gcggcgttgcaatcggaatttgaggtataa
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integrated database retrieval system
