Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3210
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Entry
PSPPH_3210 CDS
T00266
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp00071
Fatty acid degradation
psp00280
Valine, leucine and isoleucine degradation
psp00310
Lysine degradation
psp00362
Benzoate degradation
psp00380
Tryptophan metabolism
psp00410
beta-Alanine metabolism
psp00640
Propanoate metabolism
psp00650
Butanoate metabolism
psp00907
Pinene, camphor and geraniol degradation
psp00930
Caprolactam degradation
psp01100
Metabolic pathways
psp01110
Biosynthesis of secondary metabolites
psp01120
Microbial metabolism in diverse environments
psp01200
Carbon metabolism
psp01212
Fatty acid metabolism
Module
psp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSPPH_3210 (fadB)
00650 Butanoate metabolism
PSPPH_3210 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSPPH_3210 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSPPH_3210 (fadB)
00310 Lysine degradation
PSPPH_3210 (fadB)
00380 Tryptophan metabolism
PSPPH_3210 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSPPH_3210 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSPPH_3210 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSPPH_3210 (fadB)
00930 Caprolactam degradation
PSPPH_3210 (fadB)
Enzymes [BR:
psp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSPPH_3210 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSPPH_3210 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSPPH_3210 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSPPH_3210 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AAZ34330
UniProt:
Q48GW3
LinkDB
All DBs
Position
complement(3720586..3722751)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLQANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVISSSARIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKESSAEDAL
KVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQSLIGLFLNDQEL
KKKAKGYDAVAKDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVG
EHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKNGKGFYAYETDKKGKP
KKVNDPAVLDVLKPIVYEQREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADQYAELGALYQPTAKLREMASKGQSFFGQASSE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgatctcaagggtgagtccgtcaacaagttcaaccgcctcaccctcaatgaattg
cgtcaggcagtcgatgcaatcaaggccgatgcctcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggtgccgacatcaccgagttcgtcgacaacttcaagttg
cccgaagccgaactggttgcgggcaatctgcaagccaacaggattttcagcgatttcgaa
gatctgggcgtccccaccgttgtcgctattaacggcattgcgctgggcggcggtctggaa
atgtgcctggccgcagactatcgggtcatctccagcagtgctcgcatcggtctgcccgaa
gtcaagctgggcctataccctggtttcggcggtactgtgcgtttgccgcgcatcatcggt
gctgacaacgcaatcgaatggatcgcgtcaggcaaggaaagctccgcagaggatgctctg
aaggttggtgccgttgatgcggtagttgcacccgagaagcttcaggccgcggcccttgac
ctgattcagcgcgccatttccggcgagttcgactacaaggccaagcgccagcccaagctg
gacaagctcaagctcaatgccatcgagcaaatgatggcattcgaaaccgccaaaggtttt
gtcgcaggtcaggccggaccgaactatccggcaccggtcgaggcgatcaagaccatccag
aaagccgccaatttcggtcgtgacaaggcgctggaaatcgaagccgccggtttcgtgaaa
atggccaagacatctgctgcgcagagccttatcggcctgtttctgaacgatcaggaactg
aaaaagaaagccaagggctacgacgcagtcgccaaggacgtgaaacaggccgccgtactg
ggcgccgggatcatgggcggcggcattgcctatcagtcggcagtcaagggcacgccgatc
ctgatgaaggatatccgcgaagaagccattcaactgggtctgaacgaagcctccaaactg
cttggtggtcgcctggaaaaaggccgtctgactgcggcgaagatggccgaagcgcttaac
gcgattcgtcctacgctttcctacggcgatttcggcaacgtcgacctggtggtcgaagcg
gttgtcgaaaacccgaaggtcaagcaggcggtactggcggaagtcgaagccaacgtgggt
gagcacaccattctggcgtccaacacttcgaccatctcgatcagcttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaagaagcggttgccacgaccgttgcc
tacgccaggaaaatgggcaagaacccgattgtggtcaacgactgcccgggctttctggtc
aaccgcgtactgtttccgtacttcggcggttttgccaggctggtcagcgcaggcgtggat
ttcgtgcgcatcgacaaggtcatggagaaattcggctggccgatggggcctgcctacctg
atggacgttgtcggtatcgacaccggccaccatggccgtgatgtcatggccgaaggtttc
cctgaccggatgaaggatgatcgccgctctgtggttgacgcgctgtatgaagccaaacgt
ctgggacagaagaacggcaagggcttctatgcctacgagaccgacaagaagggcaagccc
aagaaggtcaatgacccggctgtgctggatgtgctcaagccgatcgtttacgaacagcgt
gaagtgagcgatgaagacatcatcaactggatgatgatcccgttgtgcctggaaacggtt
cgctgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggcctgatctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgactccatcggtgtt
gccgaattcgttgccctggctgaccaatacgccgagctgggtgccctgtatcaaccgacc
gcgaagctgcgtgaaatggccagtaaaggccagagcttcttcggtcaagcgtcttccgag
gaatga
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