Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3569
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Entry
PSPPH_3569 CDS
T00266
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_3569 (sbcD)
DNA repair and recombination proteins [BR:
psp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPPH_3569 (sbcD)
Archaeal homologous recombinant proteins
PSPPH_3569 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AAZ33142
UniProt:
Q48FW8
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All DBs
Position
4110648..4111892
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AA seq
414 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLTWLLARLAERKPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVNAHERQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVMWLDDGVLDA
ERLLLPLPDAEGKVKAWCLALPFLRPAEVTGPTLGDDYLRGIGRVHELLIEAANLKRQPG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSITYVALGHLHKPQRVNGEER
IRYSGSPIPLSFSEIGYQHQILEINCDGETLTSVQPCLIPRAVNLQRLGPAPLADLLIQL
KALSDIDLLADPDRQPWLEVRVRLDEPQPDLRNQIETALQGKAVRLVRIGAEYAGKGSAE
GNEGEAALIELDQLTPQELFSRAWQDNFGSEVDEQTLTDFATLLREVQQESEQT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctctgactggcatctgggtcagaacctgcacggtcaggagcgg
gatttcgaacacgcctgctttctgacctggctgctggcccgtctggccgaacgaaaacct
gatgtactgttgatcgcgggcgacatcttcgacaccgtcaacccgccggtcaaagcgcag
gaacgcctgtacgacttcatcgtcaacgcccatgaacggcagccgctgctgaccatcgtg
atgatcgcaggcaaccatgactccggctcgcgtatcgaactccccgcaccgttgatgcgc
cgcttgcgtactcacgcactgggcagggtgatgtggctggacgacggtgtgctggatgcc
gaacgcctgctactgccgttgccggacgcagaaggcaaagtcaaagcctggtgcctggcg
ctgcccttcctgcgccctgccgaagtcaccggcccgacgctgggtgacgactacctgcgc
ggtattggtcgggttcatgagctgctgatcgaagcagccaacctcaagcgccagccaggt
caggcactgatcgccatcagccacgcgcacatggcgggcggttcggtctcggaagactcc
gagcgcagcctgatcatcggcaacgccgaagccctgcccgccagtctgttcggaccgagc
atcacctatgtcgcgctgggccatttgcacaagccgcaacgagtcaacggcgaagagcgc
attcgctacagcggttcgccgattccactgtcattctcggaaatcggctaccagcaccag
attctcgagatcaactgcgacggcgaaacgctgaccagcgtccagccgtgcctgatcccc
cgtgctgtgaacctgcaacgcctggggcctgcgcccttggccgatttgctgatacagctc
aaggcactgtcggacatcgacctgctcgccgacccggaccgccagccgtggctggaagtg
cgggtacgcctggatgaaccgcaaccggacctgcgcaaccagatcgaaaccgcgctgcaa
ggcaaagccgtgcggttggtgcgcatcggtgctgaatacgccggtaaaggcagtgccgaa
ggcaacgagggtgaagccgccctgatcgagctggaccagctcacgcctcaggaattgttc
agccgtgcctggcaggacaacttcggcagcgaggtcgacgaacagacgctgaccgatttc
gccacgctgctgcgtgaagtccagcaggagagcgaacagacatga
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