Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3570
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Entry
PSPPH_3570 CDS
T00266
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_3570 (sbcC)
DNA repair and recombination proteins [BR:
psp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPPH_3570 (sbcC)
Archaeal homologous recombinant proteins
PSPPH_3570 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
nSTAND3
MMR_HSR1
AAA_22
Snapin_Pallidin
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AAZ34211
UniProt:
Q48FW7
LinkDB
All DBs
Position
4111889..4115533
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDIDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT
KKLQASRQILTDLDSEQVLSNQSKREFEQLIEHRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLTAQASNIVPLAPELLAELEQRL
NDAQQQLKAHQAQQRQLEIKQQWLIELHRLRDEQLAAQEAITRAQQAWDDQSGARQTLGQ
LERLGPQRHRFARRVTLNAQLNPLAEQILQHQQQQASLQDQQRQLETRRTQAQASLLEAQ
QNHSSAKPLLQQAFDTQNTLNHLAQELAKVSDLHLQTGQLCTEGQASLHILLDQQQLVSQ
RLERIAGQLEHSSELAPLAQAWSAWRDRLKSLTLIANRLKHGQSELPALQQRASTADQQL
TEQRNALELLYREADCEVDAVTEQVQILGSLLQDNRKQQRAFEDLARLWTSQQDVDRQLA
DLAQQQQSAQQQREQLNSEGIRVRDELTVAEQTLTVTRQLLERQRLARSASVEELRVQLQ
DDQPCPVCGSIEHPWHQPEALLESLTQHDDNEQASAQKAVDQLTEQRNQLREQVGGVIAR
QKELLRQHEQLTLRHQALAPDLESHPLAAQLLDHDPGKRDSWLSQQLNNLSEVITRDEQR
QEALLTLHKDAARLQKQLQAATEASQTAASHVAEQLKQLDVDRQRLDEELSAFTPLVSPH
VLEGLRSDASATVMQLEQQVTQRLDQLEQQHEEQQEQSERQQKIEKQQIEQQTRLHRQTE
LAQEVARLGEQQQASQQALTGLLGEHATAEHWQQALENAIEQARQTESSAAEALQQIQSQ
LIQLAAELKSAQQQQQSLQQELAELDVQISEWRGQHPELDDTALDTLLTYDDAHVEQLRL
QLNATDKALEQAKVLLQERDQRLQQHQAQHSDLSDSTQLAAALQQAHEQSALGEQQCADL
RAELSEDQRRRNANSELQARINDANDEYLRWARLASLIGSAEGDKFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIEVGN
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccttgccattcgcctgaaaaaccttgcctcgctggccgggccgtttgaaatc
gatttcactgccgagccgctggccagcgccggtctgttcgccattaccggcccgaccggc
gcaggtaaaagcaccctgctcgacgccttgtgcctggcgctgttcggagcgattccgcgg
ctgagtaatatcgggcagtccaaggtcccggacatcgacggcgacatcaccaccagcgac
ccgcgcaccctgctgcggcgtggcacgggcagcggttacgcagaagtggactttatcggc
atcgatcagcgccgttatcgcgcccgctgggaaaccaaccgcgcacgcgacaacgcgacc
aaaaagctgcaggccagtcgccagatcctgaccgacctggacagcgaacaggtgctcagc
aaccagagcaagcgtgaattcgagcaactgatcgagcaccgtctggggctcaacttcgag
cagttcacccgtgccgtgatgcttgcccagagcgagttcagcgccttcctcaaggccgac
gataaggaacgcagcgaactgctggagaagctgaccaataccgccatctacagccagctc
gggaggcgcgcctacagcaagagcaaagaggccgaggaagcgcttaaaacccttaccgcc
caagccagcaacatcgtcccgctggctccggagctgctggccgaactggagcaacgcctc
aacgacgcacagcagcagctcaaggcgcaccaggcacagcaaaggcaactggaaatcaaa
cagcagtggctgatcgagctacaccgcctgcgcgacgaacagcttgccgcccaggaggcg
atcacccgtgctcaacaggcctgggacgaccagagcggtgcacgtcagacccttggccaa
ctggaacgcctgggcccgcaacgccaccgtttcgcgcgtcgagtcacgttgaacgcccag
ctcaacccgctggcggaacagattcttcagcatcagcaacagcaggcttcgctgcaagat
cagcagcgacaactggagacccgccgcacccaggcgcaggccagtctgctggaggcccag
caaaaccacagcagcgccaagccactgttgcagcaggcttttgacacacagaacacgctt
aaccacctggctcaggaactggccaaggtgtctgacttgcatctgcaaaccgggcagctt
tgtactgagggtcaggccagcctgcacattttgctcgaccagcagcaactggtttcgcag
cgccttgaacgtattgccgggcagctggagcacagcagcgaactggcccccctggctcag
gcctggagcgcctggcgcgaccggctgaaatccctcacgctgatcgccaaccgcctcaag
cacggacagagtgaactgcctgcactgcagcaacgtgccagcacggccgatcaacagttg
accgagcaacgcaacgcgctggaattgctgtaccgcgaagccgattgcgaagtggatgcg
gtcaccgaacaggtacagattctcggcagcctgctgcaggataatcgcaagcagcaacgc
gcgttcgaagacctggctcgtctgtggactagccagcaggacgtagaccggcaactggcc
gatctggcgcagcaacagcaaagcgctcagcagcaacgcgaacagctcaacagcgaaggc
attcgcgttcgtgatgaactgaccgtcgccgaacagaccctgaccgttacccggcaactg
ctggaacgtcaacgcctggcccgcagcgccagcgtcgaggaattacgcgtccagctgcag
gacgaccagccctgcccggtctgcggcagcatcgaacacccttggcatcagccggaagcg
ttactggaaagcctcacgcagcatgacgacaacgagcaggccagtgcgcagaaggcggtg
gaccagctgaccgaacagcgcaaccaattgcgcgagcaggttggcggcgtgatcgcccgc
cagaaagagctgcttcgccaacacgagcagctcaccctgcgtcatcaagccctggcaccg
gatttggaatctcatcccctcgcggctcaattgctcgaccacgacccaggcaagcgtgac
agctggttgagccagcaattgaataacctgagcgaagtcatcacccgtgacgagcaacgc
caggaagcgttgctgaccctgcataaagacgccgcccgcttgcagaagcaacttcaggca
gccacagaagccagtcagactgcggcgagccatgttgccgagcagctcaagcagctggac
gtcgacaggcagcggctggacgaagaactgagcgcattcacgccgctggtctcgccacac
gtgcttgaagggctgcgcagcgatgcatcggcgacagtgatgcagcttgagcagcaggtg
actcagcgtctggatcaacttgaacagcaacacgaagagcaacaggagcagagcgagcgc
cagcagaagatcgaaaagcaacagatcgagcagcagactcgcctgcaccgccagaccgaa
ctggcgcaggaagtcgcccggctaggcgagcagcaacaggccagccagcaggcactgacc
ggcttgctgggcgagcatgcgactgccgagcactggcaacaggcgctggaaaacgccatc
gagcaagccaggcaaaccgaaagctcggccgccgaggctctgcagcagattcaaagccag
ttgatccagctggctgccgaactcaagtccgcccagcaacaacagcaatccttgcagcag
gaactggctgaacttgatgtgcagatcagcgaatggcgcggccagcatcccgagctggac
gataccgcgctcgacacgctgctgacttacgatgacgcgcatgtcgagcaactgcgtctg
caactgaacgctaccgacaaagcgctggagcaggcaaaagtattgctgcaggagcgcgat
cagcgcctgcaacagcatcaggcgcaacacagcgaccttagcgacagcacgcaactggcg
gcagcgctgcaacaggcccatgaacagtccgcgctcggcgagcagcaatgcgccgacctg
cgtgccgaactcagcgaagatcagcgccgtcgcaacgccaacagcgagttgcaggcgcgc
atcaacgatgccaatgacgaatacctgcgctgggcacgcctggcatcgctgatcggctcg
gccgaaggcgacaaattccgcaagatcgcccaagcctacaaccttgacctgctggtccat
cacgccaatgcgcagctccggcaactggtgcgccgctaccgcctgaaacgcggcggcagc
atgctcggcctgctggtcatggacaccgaaatgggcgacgaactacgttcggtccactcg
ctgtcgggtggcgaaaccttcctggtttcgctggcgttggcgctgggactggcgtcgatg
gcctccagcacgctgcgtatcgaatcgctgttcatcgacgagggcttcggcagcctcgac
ccggaatcgctgcaactggcgatggacgcactggacggcttgcaggcacagggtcgcaag
gtcggcgtgatctcccacgtacaggaaatgcatgagcggattccggtgcagatcaaagtg
cgtcgtcaggggaatgggttgagcacaatcgaggtgggtaactga
DBGET
integrated database retrieval system
