Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3813
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Entry
PSPPH_3813 CDS
T00266
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psp03016
]
PSPPH_3813 (truD)
Enzymes [BR:
psp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PSPPH_3813 (truD)
Transfer RNA biogenesis [BR:
psp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSPPH_3813 (truD)
Prokaryotic type
PSPPH_3813 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
E3_binding
Motif
Other DBs
NCBI-ProteinID:
AAZ33849
UniProt:
Q48F86
LinkDB
All DBs
Position
complement(4364812..4365870)
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AA seq
352 aa
AA seq
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MNELELLGPRAYGDALGRAALKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRLARAAGVQLRTVSYAGLKDRQALTRQWFSIQLPGKADPDLSAAQDDTLQILKSTRHKR
KLQRGAHAANGFTLRLTQLDADTDALNQRLEIIARQGIPNYFGTQRFGYQGGNLGEARDY
AARKALPEQRAVRSRLLSTARSYLFNRVLAARVADGSWEKAQVGDLLAFTDSRSFFPAGV
DECSDPRLAILDLHPTGPQWGEGHSPAGGATAELENAIANDESALREWLVRAGMEHERRI
LRLPIGRLTWHYPESDILQLEFVLPPGCFATVLVRELIDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacttgaactgctcggccccagggcctacggcgatgcactgggtcgtgcagcc
ctcaaggcgactgccgaagactttcaggtcgacgaggtgctggacattccgctttcaggc
gatggcgagcatttatggctgtgggtcgaaaaacgcggtctgaataccgaagaggcggca
cgtcggctggcccgggccgcgggggtgcagttgcgtacggtcagctatgccggtctcaag
gaccgccaggcactgacccgccagtggttcagcattcaactgccgggcaaggccgatcct
gatctgtcggccgcgcaggacgatacgctgcaaattctcaaaagcactcgacacaagcgc
aagctacaacgcggtgctcacgcagcgaatggctttacgctgcggctgacgcaactggac
gctgatacggacgctttgaaccagcgccttgaaataattgcccggcagggcatccccaac
tactttggtacgcagcgtttcggttatcagggcggaaatcttggcgaggcacgcgattac
gctgcccgcaaagcgctgcctgagcaacgtgcggtgcgttcgcgattgttatccacagcg
cgcagctacctgttcaatcgggttctggcagcccgcgttgccgatggcagctgggaaaag
gctcaggtaggggatttgctcgctttcaccgacagccgcagcttttttccggcgggtgtt
gatgagtgcagcgatccccggctggcaattctcgatctgcaccctaccgggccgcagtgg
ggtgaaggccattcgccagccggtggcgcgacggcagagctggaaaatgccatcgccaat
gatgagtctgcgttgcgtgagtggctggtcagagcgggcatggagcacgaacgacgcatc
ctgcgactgcccattgggcggctgacgtggcattatcccgagtctgacattctgcaactg
gaattcgtccttccgcccggatgcttcgccaccgttttagtgcgcgaactcattgatctg
gtgccggttgggcagacggacagcccatgcgtattctga
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