Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3948
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Entry
PSPPH_3948 CDS
T00266
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psp03019
]
PSPPH_3948 (rnc)
03009 Ribosome biogenesis [BR:
psp03009
]
PSPPH_3948 (rnc)
03036 Chromosome and associated proteins [BR:
psp03036
]
PSPPH_3948 (rnc)
Enzymes [BR:
psp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PSPPH_3948 (rnc)
Messenger RNA biogenesis [BR:
psp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSPPH_3948 (rnc)
Ribosome biogenesis [BR:
psp03009
]
Eukaryotic type
90S particles
RNase
PSPPH_3948 (rnc)
Prokaryotic type
rRNA processing factors
PSPPH_3948 (rnc)
Chromosome and associated proteins [BR:
psp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PSPPH_3948 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
MmeI_N
Motif
Other DBs
NCBI-ProteinID:
AAZ37163
UniProt:
Q48EV3
LinkDB
All DBs
Position
complement(4510505..4511194)
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AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEAARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIHG
EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtatccttgagccgccttgagcgtcagctcggctataccttcaaggatcaggaa
ctgatggtcctggccctgacccatcgcagttttgccggtcgcaacaacgagcgtctggaa
tttctcggtgatgccattctcaacttcgtggcgggcgaggcgttgttcgaacgcttccct
caggcccgcgaaggccagttgtcgcgcttgcgtgcgcgcctggtgaagggtgaaaccctt
gcgttgctggcccgtggtttcgatctgggcgagtaccttcgcctggggtccggcgagctg
aaaagtggtggtttccgtcgcgagtcgattctcgccgacgcccttgaagcgctgatcggg
gcgatctacctggacgctggcatggaggctgcgcgcgagcgcgttctggcctggctgaca
accgagttcgacagcctgacgctggtagacaccaacaaggaccccaagacccgactgcag
gaatttctccagtcgcgggcctgcgaactgccgcgttacgaggtggtggatatccacggt
gaaccgcattgccggacgtttttcgtcgaatgcgagatcaacctattgaatgaaaaaagc
cgaggacagggtgtcagccgccggattgccgaacaggtagccgcagcagcagcacttatt
gccctgggcgtggagaacggtcatgaatga
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