Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3992
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Entry
PSPPH_3992 CDS
T00266
Symbol
pnlA
Name
(GenBank) pectin lyase
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AAZ35927
UniProt:
Q48ER3
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Position
complement(4556707..4557963)
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AA seq
418 aa
AA seq
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MRLLGVLLQCVSALFLMLSGAQYLEAADLPEGFAKGVTGGGAAAAVHPSTLDQLRSALCA
SYDSRGACTDETPRVIVLEHLFDFRGSLVAKGSAETTEPGCMLKQCPHGGEQLALNGPNN
FCQSRPPVMVTYDNAGLKPLKVGSNKTLIGVGKKAGIQGAGLFIGDGAHNVIVRNLTLSD
INPSVVWGGDALTLNKADGVWIDHNTFARIGRQMIVTGWGTASHVTISSNEFDGRTPYSS
TCDGHHYWVWLFLGSQDTLTLSKNYIHDASGRAPHSGGMNNAQVRAQLVNNVFQRMTYQG
AIMSRTSSSQLLVEGNDFENVAHPLFNDTDQPGTAFALFGPGSTGANDVCMSVIGRACVA
NQQQMSGDDYRPQDTSVLEAFRDYRQFLVVPVSAQEARGQVMRDAGVGKVDVGSWESR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttgggtgttcttttgcaatgcgtttctgctttgttcctgatgctgtcgggt
gcgcaatacctggaggcagcggacttgccggaaggttttgccaaaggggttacgggtggc
ggagccgccgcggcagtacacccttcaacgcttgaccagcttcggtctgcactgtgcgcg
tcttacgactcgcgcggtgcctgtaccgatgaaaccccgcgggtcattgtgctggagcac
ctgttcgactttcgtgggagtctcgttgccaaaggcagcgccgaaaccaccgaaccgggc
tgcatgctcaagcagtgtccgcatggcggcgagcagcttgctctcaatggtcccaacaac
ttctgccaatccaggccaccggtcatggtgacctacgacaatgcagggctgaagccactg
aaagtcggatcgaacaagaccctgataggcgtgggcaaaaaggccggtatccaaggtgcg
gggctgttcatcggtgacggcgcgcataacgtgattgtccgtaacctgacgctttcagac
atcaacccgagtgtcgtatggggcggagatgcgctcactctgaacaaagccgatggcgtg
tggattgaccacaacaccttcgcccgtatcggcagacaaatgatcgtgacaggctggggc
actgcttcacacgtcaccatttccagcaatgagttcgatggtcgcacgccttactcgtcg
acctgcgatggccatcattactgggtctggctgttcctcggcagtcaggacacgctgacg
ctgtcaaaaaactacatacacgacgcctcgggaagagcgccgcactccggaggcatgaat
aatgcgcaagtccgcgctcaactggtcaataacgtctttcagcgcatgacttaccaaggc
gcaatcatgtcgcggacttcatcttcacagttgctggtggaagggaatgattttgaaaac
gtagcccatccactgttcaacgatacggatcagccgggtacagcgtttgctttgtttggg
ccgggttcaactggcgcaaacgatgtgtgtatgagtgttattggaagagcgtgtgtggcg
aatcagcaacagatgagtggcgatgattatcgtcctcaggacacatctgtgctggaggct
ttcagggattatcggcagtttctggtggtgccggtttcggcgcaagaggccagagggcag
gtgatgcgtgacgcgggagtggggaaggtggatgttggttcatgggaatcacgatag
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