Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_4187
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Entry
PSPPH_4187 CDS
T00266
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psp03016
]
PSPPH_4187 (truB)
Enzymes [BR:
psp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSPPH_4187 (truB)
Transfer RNA biogenesis [BR:
psp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSPPH_4187 (truB)
Prokaryotic type
PSPPH_4187 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AAZ33313
UniProt:
Q48E79
LinkDB
All DBs
Position
complement(4774569..4775486)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGKTTTTADSEGEVLLTRPVTVGRDDIEAVLPHFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVGEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgccgcaacgtcagcgggatcatcctgctcgacaagcca
ctgggtttcacttccaacgccgctttgcaaaaggttcgctggctgctcaatgccgagaaa
gccgggcatacgggcagtcttgatcctctggcaacgggtgttttgccgttgtgctttggc
gaagcgaccaagttttcccagtacctgctcgattcggacaagtcctacgagactctggcg
cagttgggcaagaccaccacgaccgccgactctgaaggcgaggttttgctcacgcgtccg
gtgaccgttggtcgcgacgatattgaagcggtgttgccgcattttcgtgggcaaatcagc
cagatacctcccatgtactcggccctcaagcgtgatggccagccactttacaagctggca
cgtgcaggggaagtagtggagcgcgagccccgttctgttactattgcgcgcctggaatta
cttgcttgcgaaggcgacacagcacgtctgtccgtcgattgcagcaaaggcacctatatc
cgtacgctggtcgaggatattggtgaaaagctcggttgtggtgcttacgtcgcagagctg
cgtcgtacccaggcggggcctttcacgctggctcagacggttacgctggaagagctggag
caagtgcatgccgacggcggcaatgaggcggttgaccgcttcctgatgccatcggacagc
ggtctgctggactggccgctgctgaagttttcggagcacagttcgttttactggttgcac
gggcagccagtacgcgcgccggacgcaccgaaattcggtatggttcgtgtgcaggatcac
gaaggtcgcttcatcggtatcggtgaagtcggcgaagacgggcgtattgcgccgcgtcga
ttgattcggtcagagtga
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