Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_4765
Help
Entry
PSPPH_4765 CDS
T00266
Name
(GenBank) RNA polymerase sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSPPH_4765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psp03021
]
PSPPH_4765
Transcription machinery [BR:
psp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSPPH_4765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_10
PhyR_sigma-like
Sigma70_ECF
HTH_24
HTH_11
Sigma70_r3
MerR
HTH_31
HTH_3
GerE
TnsD
HTH_40
HTH_28
HTH_5
HTH_IclR
FaeA
MarR_2
Phage_terminase
PCI
HTH_17
EAP30
Motif
Other DBs
NCBI-ProteinID:
AAZ33442
UniProt:
Q48CM8
LinkDB
All DBs
Position
complement(5409325..5409843)
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVPSTHSEIVGALYRDHRGWLLAWLRRNVACPQRAQDLSQDTFVRLLGRQELLTPREP
RAFLAAVAKGLMFDYFRRAALEQAYLGELMQVPEAEQPSPEEQMLILEDLKAIDRMLGSL
SSKARAAFLYSRLDGLSHGEIAERLGVSVSRVRQYLAQAMRQCYVALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagtcccaagcactcatagcgagattgttggcgcgctgtatcgcgatcatcgt
ggttggctgctggcctggctcagacgcaatgtcgcctgtccacagcgtgctcaggatttg
agtcaggacacgttcgtgcgtttgctcgggcgacaggaattgctgacgcccagagagcct
cgagcgttcctggcggccgttgccaagggactgatgttcgactacttccgccgcgctgcg
ctggagcaggcttatctcggggagttgatgcaggttcccgaggccgagcagccttcgccg
gaagagcagatgctgattctggaagacctcaaagcgatcgaccgtatgctgggcagcctc
tccagcaaagcacgggcagcctttctgtacagtcgcctcgacgggctgagccacggcgaa
attgccgagcggctgggcgtctcggtttcgcgcgtcaggcaatacctggctcaagccatg
cgtcagtgctatgtagcgctctacggtgagccgacatga
DBGET
integrated database retrieval system
