Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_5147
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Entry
PSPPH_5147 CDS
T00266
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03420
Nucleotide excision repair
psp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSPPH_5147 (uvrD)
03430 Mismatch repair
PSPPH_5147 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_5147 (uvrD)
Enzymes [BR:
psp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSPPH_5147 (uvrD)
DNA repair and recombination proteins [BR:
psp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSPPH_5147 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PSPPH_5147 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAZ34514
UniProt:
Q48BM1
LinkDB
All DBs
Position
5837098..5839281
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AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVMRELGLDEQRWPARQAQWFINGQKDEGLRPKHIQASGDLFLTTMKSVYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLIV
NNSGRLGKELWTDVGDGELINLYAAFNEHDEARYVVETIESALKTGISRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHADVSMWEAMRLLVANKGLTGRAATALGGFIELIENLSAKAMEMPLH
LMTQTVIEQSGLITYHEQEKGEKGQARVENLEELVSAARAFENHESEEDLTPLAAFLGHA
SLEAGDTQAQEHEDSIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMKQLVMTYAETRRLYGSETYNKVSRFVREIPPALIQEVRLSNSVSRPFGGTP
KFNSSSLFNGTGIPETEFAMGQRVQHAVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLVPL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttcttctgaattccctcaacgatgcccaacgtcaggccgta
gccgcctcattgggtcgtcagttggtcctggctggtgctggctccggcaaaacccgtgtg
ctggtgcatcgcatcgcatggctgatgcaggttgagcaagcctccccgcattcggttctg
tcggtgacgttcaccaacaaggctgccgccgaaatgcgccaccgtatcgagcagctgatg
ggcatcagccctgctggcatgtgggtgggcaccttccacggtctggcccaccgcctgctg
cgagcgcactggcaggaagccgggctggtgcagaccttccagattctcgacagcgatgac
cagcagcgcttggtaaaacgcgtgatgcgcgagctgggcctggatgagcaacgctggcct
gcacgtcaggcccagtggttcatcaacggccagaaagatgaaggcctgcgcccgaaacat
attcaggccagcggcgatctgttcctgaccaccatgaaaagtgtctacgaagcctacgag
gtcgcctgtcagcgggctggcgtcatcgacttctccgaactgctgctgcgcgcactcgac
ctgtggcgcgataatccgggtttgctcgcgcattatcagcgtcgtttccgccatgtattg
gtggatgaattccaggacaccaacgccgtgcaatacgcgtggctgcgtctgctcgctcag
ggcggcgacagcctgatggtggtcggcgatgacgatcagtccatttacggctggcgtggc
gcgaagatcgagaacatccaccagtattcgtctgacttcccggacaccgaagtcatccgt
ctggagcagaattaccgctccacagcgagcattctcaaggctgccaacggcttgatcgtc
aataacagcggccgcctgggcaaggagttgtggactgacgtcggcgatggcgagctgatc
aacctgtatgccgctttcaacgaacacgatgaggcgcgctatgtggtcgagaccatcgaa
agcgcgctgaaaaccggcatctcgcgcaacgacatcgccattctgtaccgttccaacgcc
cagtcgcgggtgctggaagaagccctgctgcgcgaacgtattccataccgcatttacggc
gggcagcgcttcttcgaacgtgccgaaatcaagaacgcgatggcgtatatgcgcttgctg
gaaggtcgtggcaacgatgcagcgctggagcgggtgatcaacgttccggctcgcggcatc
ggcgaaaaaaccgtcgaagcgattcgcgagcatgcgcgtcatgccgacgtctccatgtgg
gaagccatgcgcctgctggtcgccaacaagggcctgaccggccgcgccgccacggccctg
ggcgggttcatcgagctgatcgagaacctgtcggcgaaggccatggagatgccgctgcac
ctgatgacccagacggttatcgagcagtccgggctgatcacctatcacgagcaggaaaaa
ggcgagaaaggccaggcgcgggtagaaaaccttgaggaactggtcagcgcggcccgtgct
ttcgagaatcacgaaagcgaagaagacctgacgccacttgcagcgtttttggggcatgcc
tcactggaggccggcgacacccaggcgcaggagcatgaagacagcattcagctgatgacc
ctgcacagcgccaagggcctggagtttccgcatgtgttcctggtgggcatggaggaaggg
ctgttcccgcacaagatgagtctggaagagccggggcgcctggaagaagagcgacgtctg
gcttatgtcggcatcacccgcgccatgaaacagctggtgatgacctacgccgaaacgcgt
cgtctgtacggcagcgaaacctacaacaaggtctcgcgtttcgtacgcgagattccgccg
gcgctgatccaggaagtgcgcctgtccaacagcgtgagtcgcccgttcggtggcactccg
aagttcaacagcagcagcctgttcaacggcaccggcattccggaaaccgagttcgccatg
ggccagcgcgtacagcatgcggtgttcggcgaaggcgtgatcctcaacttcgagggcgct
ggcgctcaggcacgggtgcaagtcaacttcgccgaaggcagcaagtggctgatgatgggc
tatgcgaagctggtgccgttgtag
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