Polyodon spathula (Mississippi paddlefish): 121294078
Help
Entry
121294078 CDS
T07273
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121294078
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121294078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121294078
03036 Chromosome and associated proteins [BR:
pspa03036
]
121294078
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121294078
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121294078
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
121294078
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
121294078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
Motif
Other DBs
NCBI-GeneID:
121294078
NCBI-ProteinID:
XP_041073570
LinkDB
All DBs
Position
2:complement(22125673..22195865)
Genome browser
AA seq
1282 aa
AA seq
DB search
MAQTKRHMYSRVPSSSSSRMSSDGTGKPIKVGSRVEVIGKGYRGTVAYIGATLFATGKWV
GVILDDAKGKNDGTVQGKRYFTCEENHGIFVRQSQIQLVDDGADTTSPETPEPLASKYPK
RELLETPKSSKLRGVKLKKTPTPRKTPARRTKPTRPPSSAASSATAGPSGSASASGGDMS
SSEPSTPAQTPLAAPMIPTPSMGLTSPGAHPHPTASKEEEALRVQVKDLEEKLETLKMKR
SEDKAKLKELEKYKIQLEQLQEWKSKMQEQQADVQKQLKEAKKEAREALEAKDRYMEEMA
DTADAIEMATLDKEMAEERAESLQQEVDSLKEKMEELTMDLEILKHEIEEKGSDGAASSY
HVKQLEEQNGRLKEALVRMRDLSASEKQEHVKLQKQMEKKNSELEILRQQKEKLMEEMMQ
AEKIIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETASDLEAINEMNDELQENA
RETELELREQLDLGSVQVREAEKRVEAAQETVADYQQTIKKYRELTAHLQEVNRELMSQQ
EASAEQQQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVNQANRQVSLLTSFMPDSFL
RHGGDHDCILVLLLIPRLICKAELISNQAQEKFDLNENCVARPGLRGAVGEQLSFTAGLV
YSLSLLQATLHKYEQALNQCSVEVYKKIGTLYPEMSVHERSLDFLIDLLHKDQLDETVNV
EPLTKAIKYYQHLYSIHLAEQHEDCTLQLADHIKFTQSALDCMGVEVGRLRAFLHTGQEA
ADLAILLKDLETSCSDIRQFCKKIRRRMPGTDVPGIPAALTFGLPVSETLMDCRKHLTWV
VAVLQEVAAAGAQMIAPLTEQEGLSALKLEDMAFKAGEQIYGAQGISPYDCLRQSCSIVI
ATMNKMATAMQEGEYDADRPQNRPTPPVELRAAALRAEITDAEGLGLKLEDRETVIKELK
KSLKIKGEELSEASVRLSLLEKKLDSSSKDADERVEKIQTRLDETRALLKKKEKEFEETM
DALQADIDQLESEKAELKQRLNNQSKMTIDGLQRPPASGIASIVTGVAAEEQQKGVGSMQ
SMGGGSGPVQVIDSPLLLQQIDAQRLGIKYLKNENNRLKAEKMNAQLASLPPLRVSKLPL
KEGVNTDLQSNPLYRKTSQLLETLLQMSANMKVVDITGKTPVSPTAQLMEQTARLKSLSD
TLDRLKDEVAEHVVSQRPGARVPSDFATFPSSSFVKAQVEQKDDTVLIGRVMFPCPRGQE
QIHRVVLTPPQLHKVHRLLLST
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccaaaagacacatgtacagccgggtgccgagtagcagcagcagcaggatg
agctcagacgggaccggcaagcctatcaaggtgggctcccgggtagaggtgatcggtaag
gggtaccgcggcaccgtggcatacatcggagccaccctgttcgccaccggcaagtgggtg
ggagtcattcttgatgatgccaagggcaagaacgacggcacggtgcagggcaagaggtac
tttacttgtgaggagaaccacggcatcttcgtccgacagtcacagatccagctggttgac
gatggagcagacaccacttctccagagacccctgaacccttggcttcaaagtaccccaaa
cgagagctattggaaacgcctaaatccagcaaactgcgaggagtgaaactcaagaagacc
ccaactcccaggaagaccccagccaggcggaccaagccaacgcggccccccagctcggca
gcatccagtgccacagcgggtccctctgggtcagcctcggcctccgggggggacatgagc
agcagcgagcccagtacccccgcccagacccccctggcagcacccatgatccccacccct
agcatgggcctcacctctccaggagctcaccctcatccaactgccagcaaggaggaggag
gccctgcgtgttcaggttaaggacctggaagaaaagctggagacactgaagatgaagcgc
agcgaggacaaggccaagctcaaggagctggagaagtacaagatccagctggaacagcta
caggagtggaagagcaagatgcaggagcagcaggctgacgtgcaaaagcagctaaaggag
gccaaaaaggaagccagagaggctctggaggcaaaggatcgctacatggaggagatggca
gacacggcggacgcgatcgagatggcaactcttgacaaggaaatggctgaggaacgagcc
gagtccctgcagcaggaggtggactccctgaaagagaagatggaggagctgaccatggac
ctggagatcctcaagcatgagatcgaggagaaaggatctgacggagctgcctcaagttac
catgtgaaacagctggaggaacagaacggcagactgaaggaggcacttgtcaggatgcga
gacctgtcggcctcagagaagcaggagcatgtgaagctgcagaagcagatggagaagaag
aactcggagctggagatcctgcggcagcagaaggagaagctgatggaggagatgatgcag
gccgagaagatcatcgatgagcttaaggagcaggttgatgctgctctgggtgcagaggag
atggtggagacactaacagagagaaacctggatctggaggagaaagtgagggagctgaga
gaaactgccagtgacttggaggccatcaacgagatgaacgatgagctgcaggagaacgct
cgggagacagagctggagctgcgtgagcagctggacctgggcagtgtgcaagtcagagag
gctgagaaaagggtagaggctgcgcaggagaccgtcgctgactaccagcagaccatcaaa
aagtaccgggagctgaccgcacacttgcaggaggtgaaccgtgagctgatgagtcaacag
gaggcctcagcagaacagcagcagcagcagccacctgcagaaatgttcgacttcaagatc
aagtttgcagagaccaaggcctacgctaaggcaatcgaaatggagctgcggaagatggag
gtgaaccaggcgaaccggcaggtgtctctgcttacctccttcatgccagactccttcctt
cgccacgggggcgaccacgactgcatcctggtgctgctgctcatcccccgcctcatctgc
aaggctgagctgatcagcaaccaggcccaggagaagtttgatctgaatgagaactgcgtg
gcaaggccaggcctgcgaggagcagtgggagagcagctaagcttcactgcaggactggtg
tactcgctcagcctgctccaggcaaccctgcacaaatacgaacaagctctgaaccagtgc
agcgtggaggtttataagaagattggcactctgtatccagagatgagtgtccatgagcgc
tccctggacttcctgattgacctcctacacaaggaccagctggacgagacggtcaatgtg
gagcccctcaccaaggccattaaatactaccagcacttgtacagtatccacctcgcagaa
caacatgaggactgcaccctgcagcttgctgaccacatcaaatttacccagagtgccttg
gattgcatgggagtggaggttggcagacttcgggccttccttcatactggacaggaagct
gcagatcttgccatccttttgaaggacttggagacgtcctgcagtgatattcggcagttc
tgtaagaagatccgccgccgcatgcctggaacagacgtgcctggcatcccagcggcactc
acctttggactgccggtgtcagaaaccctgatggactgtcggaagcacctgacatgggtg
gtggctgtgctgcaggaggtagctgcagccggggcccagatgatcgcccccctcactgag
caggagggtctgtctgcactcaaactggaagacatggccttcaaagcaggggaacagatc
tatggtgcccagggtatcagcccctacgactgcctgcgccagtcctgcagcatcgtcatc
gccaccatgaacaaaatggcaacagccatgcaggaaggggagtatgatgctgacagacct
cagaacaggccaactcctccagtggagctgagagcagcagcactgagagcggagattacc
gatgcagaggggctggggctcaaattagaggacagagagacagtcatcaaggagcttaag
aagtccctcaaaatcaagggtgaggagctgagtgaagccagtgttcgtctgagtctcctg
gagaagaagctggacagctcctcgaaggacgcagatgaaagggtggagaagatccagacc
aggctggacgagacccgggcactgctcaagaaaaaagagaaggagtttgaggagacaatg
gatgctctccaggcagacatcgaccagcttgagtcggagaaagcagaactgaagcagcgc
ctcaacaatcaatccaaaatgaccatcgatggtctgcaaaggccgcccgcatcggggatc
gcttctatcgtcactggtgttgcagccgaggaacagcagaaaggtgttgggagcatgcag
tccatgggcggtggctccggcccagtccaggtgatcgactctcctctgctcctccagcaa
attgatgcccagcgactcggcatcaaatatctcaagaacgagaacaaccggctcaaggct
gagaagatgaacgctcagttggcatccctgccgcctctgcgtgtttccaaactgcctttg
aaggagggagtgaacacagacctgcaatccaaccccctgtaccgtaagaccagccagctg
ctggagacgctgctgcagatgagtgccaacatgaaagtggtggacatcaccggaaaaaca
ccagtgagccctactgcacagctgatggagcagactgcccgtctcaagagtctgagtgac
acactggacagactgaaggatgaagtggccgagcatgtggtgtctcagcgccccggtgcc
cgtgtgccctcggacttcgccactttcccctcctcctcctttgtcaaggctcaagtggag
cagaaggacgacactgtgctcataggaagagtgatgttcccttgtccccgcgggcaggag
cagatccacagggttgtcctaacaccgccacagctgcacaaagtgcaccgcctgctcctc
tccacctag
DBGET
integrated database retrieval system
