Polyodon spathula (Mississippi paddlefish): 121294134
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Entry
121294134 CDS
T07273
Name
(RefSeq) RING finger protein 145-like isoform X1
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121294134
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121294134
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121294134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_11
RING_XB3-XBAT31
Prok-RING_4
zf-P11
zf_RING_Vps8
zf-RING_16
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
121294134
NCBI-ProteinID:
XP_041073657
LinkDB
All DBs
Position
2:complement(22606434..22624355)
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AA seq
895 aa
AA seq
DB search
MPRLEEIANVALRVPSILLLDLLYKFDIDSVTEQLRSKNEDMMFKYKYVIWNIYYLGHLF
SVVVLVLPLRHIVKLYLYILTVLLIYVGHQISRDYVQGEIQHGYDRAVYLDSLAFNRFAT
ALTSQVILSTLCAFLMKTRQVWLFSAHLLPLVARLFAVPHNMLLTVNNFSMVLTAIEVAA
FLLSNLFVPYKLARSAYREVLQIEITELYRLLAVGISLWNQFAVPTLLSVFWFILFVVQI
YSSATARNNFPSQQGVLYVFLTSVSKCCSTPYSLLGLTFIVSYLALGLLNLCKFYLGGYA
AVHNENVMHRGVTEGVTLLLLALQTGLLDMQVLQRTFLLSIILFIVVTSMLQSMVEITDP
IILALGASRNRSVLKHFRGVSMCLFLLVFPGFMAYKISQFFHMDFWLLILVSSCMLTSLQ
VMGTLLIYMLFMIELVRSYPIESLDEIIYYVNAVSRVLEFLVALCVVCYGTWESLFGEWS
WMGASVIIIHSYFNVWLRAQSGWKSFLLRQEAAKKIHSLPRATAQQLEQHSDVCAICFQE
MDSAVVTYCGHFFHANCLRKWLYVQETCPMCHQQVKPSVLRQNGSAQEGQAPAAHREEGR
REAFQAGETGTQASGFRPTHGADVRNEPEDSENDLDNSLSEGGEGESDDNITCEGDSLDG
EEQTLASGLCCSGNVGGNIDLAIQNTTLVDTSPLTAEESAVNIMKSETGEEKEENFGYTS
LQGVGDILTAKRSTVGHVMAEAVICRGNAETLSPGLMFQPTGGSWDFTDTQSVQVELSHH
LKVHTTDKSCSLSRLLGSNEEDLVRDDHSEKVDNGLLLETLGKAPLLSHSGMLLNTLTAK
DAVLAEEMNDQESFRNHAYSPPPQGQEHSVSTVTQVGDFKEDDLENICVQGNHFL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgccaagactggaagaaattgcaaatgtcgctctgagggtaccgagcattcttcttctg
gacctgctgtacaagtttgacatcgacagtgttacagaacagcttcggtccaaaaatgaa
gacatgatgtttaaatacaaatacgttatctggaacatttattatttaggtcatcttttc
agtgttgttgtgctggtcttgcctctgagacacattgtgaagctgtatctttacatcctc
acagtcttactgatctatgtgggacaccagatctccagggattatgtgcagggtgagatt
cagcatggctatgacagagcagtgtatctggactccctggctttcaaccggtttgctact
gcactgacaagtcaggtcattctgagcacgctctgtgctttcttgatgaagaccaggcag
gtctggctgttctctgctcatctgcttcccctggtggccagactgtttgctgtgcctcac
aacatgctactcacagtcaacaacttctccatggtcctcactgccattgaggtggccgct
ttcctgctctcaaacctctttgtgccctacaaattggccaggtctgcctacagggaagtt
ctgcagattgagatcactgagctgtaccgcttgctggcggtggggatttctctgtggaat
cagtttgctgttccgacactcttaagtgttttctggttcattctcttcgtggttcagatc
tactcttctgcaactgccagaaataacttccccagccagcagggagtgctctacgttttc
cttaccagtgtgtccaagtgctgcagtactccatattcgttactgggtctcaccttcatt
gtttcttacctggccctgggcttgctcaacctctgcaagttctacctggggggctacgct
gctgtccacaacgaaaacgtgatgcacaggggggtgaccgagggggtgaccctgctgttg
ctggctctccagactggactgttggatatgcaggtcctgcagcgcaccttcctccttagc
atcatcctgttcattgtggtcacctccatgctgcagtccatggttgagatcactgacccc
atcatcctggccctgggagcctcaaggaacaggagtgtgttgaagcattttcgaggggtg
agcatgtgcctgttcctgttggtgttccctgggttcatggcctataagatctcccagttc
tttcacatggatttctggctcctgatccttgtctccagctgcatgttgacatccctgcag
gtgatggggaccctgctgatctacatgctgttcatgatcgagctagttcgcagttacccc
atcgagagcctggacgagatcatctattacgtgaacgcagtgagccgcgtgctggagttc
ctggtggcgctgtgtgtggtgtgctacggcacctgggagtccctcttcggggagtggagc
tggatgggtgcctccgtcatcatcatccactcctacttcaacgtgtggctgcgtgcccag
tctggctggaagagcttcctgctgcgacaggaagccgccaagaagatccactcgctaccc
cgggcgaccgcgcagcagctggagcagcacagtgacgtgtgtgctatctgcttccaggag
atggattcggcagtagtgacgtactgtggccatttcttccacgccaactgccttcgaaaa
tggctgtatgtccaggagacctgccccatgtgtcaccaacaggtgaagcctagtgtgctt
cggcaaaacgggagtgcacaggagggccaagctcctgcagctcacagagaagagggcagg
agagaagctttccaggcaggcgagactggaactcaagcctcaggcttcaggcctacacat
ggtgcagatgttagaaatgaaccagaagattctgagaatgacctggacaacagtttgtct
gaagggggtgaaggagaaagtgatgacaatatcacctgtgaaggggactcactggatggg
gaagaacaaactttagcgtctggcctttgttgtagtggaaatgttggtggcaacatcgat
ctggccattcaaaatactacgttggtagacacatctcccctgactgccgaagagtcagct
gtgaatattatgaaaagtgaaacaggtgaagaaaaggaagaaaacttcggatataccagt
ttacaaggtgttggtgatattttaacagctaaaaggtcaactgtgggacacgtgatggcg
gaggcagttatttgcaggggaaatgctgaaactttatccccaggattaatgtttcagcct
actggtggctcatgggattttacagatacacagagtgttcaagtggagttgagtcatcat
ttaaaagtacatactaccgataaatcttgctccttgtcccgtttgcttggatctaatgaa
gaagaccttgtcagggacgaccatagtgaaaaagtggataacggtttgctgcttgaaaca
ttgggtaaagctcctcttttaagccactcgggtatgctgttaaatacgctgactgccaaa
gatgctgtgctggctgaggaaatgaatgatcaggaatccttcaggaaccacgcctacagc
ccacctccacaaggacaggagcacagcgtctcaacagtgacccaagtaggagactttaaa
gaagatgacttggaaaatatatgtgttcaaggaaatcattttttgtag
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