Polyodon spathula (Mississippi paddlefish): 121294148
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Entry
121294148 CDS
T07273
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C-like
KO
K22038
volume-regulated anion channel
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121294148
Ion channels [BR:
pspa04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121294148
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_5
LRR_R13L1-DRL21
PRIMA1
Motif
Other DBs
NCBI-GeneID:
121294148
NCBI-ProteinID:
XP_041073674
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Position
18:complement(31783116..31793356)
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AA seq
799 aa
AA seq
DB search
MIPVTEFRQFSEQQPAFRVLKPWWDVFTDYLSVAMLMIGVFGCTLQVMQDKIICLPKRIS
MANQTLLLNSTIPEPPLPPPAQPSPAPAVNEMKGLKTNLDIQQYSFINQMCYERALHWYA
KYFPYLVLIHTLVFMLCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGENPE
EKDKKKNTLNKPNLNMLVMEDNSGKTQSLKSVPEKLVVDKPTAGALDKKEGEQAKALFEK
VKKFRLHVEEGDLLYSMYVRQTVLKVLKFLIIIVYNSALVSKVQFTVSCNVDIQDMTGYK
NFSCNHTMAHLFSKLSFCYLSLVSVYGLTCLYTLYWLFYRSLKEYSFEYVRQETGIDDIP
DVKNDFSFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNNEWTPDKLRQRLQTNSSN
RLELQLFMLSGLPDTIFEVAELQSLRLEIINNVTIPASIAQLEDLQELALYQCSLKIHSA
ATSFLKENLKVLRVKFDDNRELPHWLYCLRNLEELHLTGSLSPDVSKNITLDSLRELKSL
KTLSLRSNFTKIPQCIVDVSSHLQKLYIHNDGTKLVMLNNLKKMTNLTELELVHCDLERI
PHAVFSLVNLQELNLKENNLRSIEEILSFQHLRKLTCLKLWHNGIPYIPEHIKKLTSLER
LYFSHNKIEVLPSHLFLCNKLRFLDLSYNDIRFIPPEVGVLQSLQYFSITCNKVESLPDE
LYFCKKLKIFKIGKNSLSLLSPKIANLVLLTHLDLKGNHFEALPAELGACKALKRSGLIV
EDALFETLPSEVREKMKVE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgattccagttacagagttccggcagttctcagagcagcagccagcattccgagtgctg
aagccatggtgggatgtctttacagactacctttcagtagctatgctcatgatcggagtg
tttgggtgcactttgcaggtaatgcaagataaaatcatctgccttcccaaaagaatttcc
atggcaaaccaaactctccttcttaactccactataccagagccccctctgcctccacct
gcccagccctccccagctccggccgtcaatgaaatgaaggggctgaaaaccaacctggac
atccagcagtacagctttataaaccagatgtgctacgagcgggcgctgcactggtacgca
aagtatttcccctatctggtgctcatacacacacttgtcttcatgttgtgcagtaacttc
tggttcaagtttccagggtcgagctctaaaatcgagcatttcatatctatactggggaag
tgttttgattccccttggactacccgggctctgtctgaggtgtcgggagaaaacccagaa
gagaaggacaaaaaaaagaacacccttaacaaacctaacttaaacatgctggtgatggaa
gacaactcagggaaaacacagtccctgaaatcggtcccggaaaagcttgtggtcgacaag
cctacagcaggagcacttgacaaaaaggaaggagaacaagccaaggcattgtttgaaaag
gtcaagaaattcaggctgcatgtagaggagggagatctgctttacagtatgtatgttcga
caaacagtcttgaaggtcctaaagttcctaattattattgtctataacagcgcgctggtg
tcgaaagtgcagtttacagtcagctgcaatgtggacatacaagacatgactggatacaaa
aatttctcctgcaatcacacaatggcacacttgttctccaaactgtctttttgctacctg
agtttagttagtgtgtacgggctgacgtgtctctatactttgtactggttgttctaccgc
tccctcaaagagtactcttttgagtatgtgcgtcaggagacagggatcgatgatatcccg
gatgtgaaaaacgacttttccttcatgcttcacatgatcgatcagtacgatcctctgtac
tccaagagattcgccgtctttctgtccgaagtcagtgaaaacaaattaaagcagctcaac
ttgaacaacgagtggactcctgataagcttcgacagaggctgcagacaaacagcagtaac
agactggaactgcagctttttatgctctccggccttccagacacaatattcgaagtagca
gagcttcagtccctgaggctggagatcataaacaatgttacaataccagcatctatcgcc
caacttgaggacctccaagagctcgccctctaccagtgttctttaaaaatccattccgct
gccacctcatttttgaaagaaaacttaaaggtcttgagagtgaagtttgatgacaaccgg
gagctgccacattggttatactgtcttagaaatttagaggaacttcacctcactggttcc
ttaagtcctgacgtctctaaaaatattacactcgactccttacgggagctgaagagtctt
aaaacactctccttaagaagcaacttcaccaaaatcccacagtgtattgtcgacgtttcc
agtcacctgcagaagctttacattcacaacgacggcactaaattggtcatgctaaacaac
ctgaagaaaatgaccaacctgactgagttagagctggtgcactgcgacctggagagaata
ccgcatgcagtgttcagccttgtaaacctccaagagctgaacttgaaggaaaataacctc
agatctattgaggagattctcagctttcagcatctgcggaaattgacctgcctgaaactg
tggcacaatggaatcccctacatcccagagcacattaaaaaactgacgagtctggagagg
ctgtatttcagccacaataaaatcgaggttctgccttctcacctctttctgtgcaacaag
ctccgattcttggacttgtcgtacaatgacattcggttcatcccccctgaagtcggggtt
ctgcagagtctccagtacttttccattacttgcaacaaagttgaaagtttgcctgacgag
ctttatttttgcaagaagctgaagatctttaaaataggaaagaactctttgtctctgttg
tctccaaagattgctaatttagttttattgacgcacttagacctcaaaggcaaccacttt
gaagctctccccgctgaactgggtgcctgtaaggctttgaagcgaagtggtctgattgtg
gaggatgccttgtttgaaactctgccttctgaagtcagggagaaaatgaaagtggagtaa
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