Polyodon spathula (Mississippi paddlefish): 121294260
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Entry
121294260 CDS
T07273
Name
(RefSeq) tumor susceptibility gene 101 protein-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250
Viral life cycle - HIV-1
pspa03272
Virion - Hepatitis viruses
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121294260
03272 Virion - Hepatitis viruses
121294260
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121294260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121294260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121294260
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
121294260
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121294260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
DUF3450
GPS2_interact
CENP-H
Prominin
DUF724
Vps52_CC
Exonuc_VII_L
FapA
RNase_Y_N
BRE1
Motif
Other DBs
NCBI-GeneID:
121294260
NCBI-ProteinID:
XP_041073754
LinkDB
All DBs
Position
19:9180647..9190985
Genome browser
AA seq
393 aa
AA seq
DB search
MAVVSESSLKKMLSKYKYRDLTVREITNVISQYKDLKPVMDAYVFNDGSTKDLMSLTGTV
PVGYRGNTYNIPVCLWLLDVYPYNPPICFVKPTSAMMIKTGKHVDANGKIYLPYLHEWKH
PQSDLYGLIQVMVVVFGEEPPVFSRPQVQSSYPPYQPTGPPNTSYMPGMPAVVCSYPSGH
SANPSGYPGYPYPGGNSYPTASTAQNYNSQTPVTTVGPSRDATIGEDTIRASLISAVSDK
LRWRMKEEMDRAQAELNALKRTEEDLKTGHQKLEQMVSRLDQEVTEVDRNICLLKKKDEE
LSSALEKMTSQSENNDIDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLE
VFLKHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgttagcgagagctccctcaagaaaatgctgtctaaatacaagtatcgggac
ttgacggttcgtgaaatcaccaatgtgatctctcagtacaaggacttgaaacctgtcatg
gatgcttatgtgtttaatgacggctctaccaaagatctgatgagtctgacaggaacagtt
ccagtcggctacagaggaaacacctacaatataccggtttgcctctggctgctagacgtt
tacccctataaccctccgatctgttttgtgaagcccaccagtgcaatgatgattaaaact
gggaaacacgttgatgctaatggcaagatctacctgccctacctgcacgaatggaagcat
cctcagtcggacctctacggcctgatccaggtgatggttgtagtgtttggagaagagccc
ccagtgttttcacgtccccaagtgcaatcttcctacccaccatatcagcccaccgggccc
cctaacacttcctacatgccgggcatgcctgctgtagtctgttcctacccatccgggcac
tctgcaaacccaagtgggtacccaggttatccgtaccctgggggaaactcctaccccacg
gccagcacagcacaaaactacaactcgcagacacccgtcaccactgtcggtcccagccgg
gacgccactatcggagaggacacaatccgcgcctccctgatctcagcggtcagtgacaag
ctacggtggcgaatgaaggaggagatggaccgggcccaggcagagctgaacgctctcaaa
cgcactgaagaggacctcaagacaggccaccagaaactggagcagatggtctcccgcctc
gaccaggaagtgaccgaagttgatcggaacatctgtcttctgaagaaaaaagacgaggag
ctgagctccgctctggagaagatgacaagccaatcagagaacaatgacatcgatgatgtc
attgtgccgaccgcccccttgtacaagcagatcctgaacctgtacgcagaggagaacgcc
attgaggataccatcttctacttgggggaggcactgcgcagaggtgtcatcgacctggag
gtcttcctgaagcatgtgcgcctcctgtcccgcaaacagttccagctccgagcgctgatg
cagaaagccaggaagactgcagggctgagtgacctctactga
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