Polyodon spathula (Mississippi paddlefish): 121294272
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Entry
121294272 CDS
T07273
Name
(RefSeq) CUGBP Elav-like family member 4
KO
K13207
CUG-BP- and ETR3-like factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121294272
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121294272
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
121294272
NCBI-ProteinID:
XP_041073771
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Position
19:complement(16939690..17264604)
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AA seq
482 aa
AA seq
DB search
MATVTANGLQQENGFSTMNSSGRMNGLSMGQSTIPMKDHDAIKLFIGQIPRNLEEKDLKP
LFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSTLHEQKTLPGMNRPIQVKP
ADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEAFGQIEECTILRGPDGASKGCSFVKFSCH
AEAQTAINNLHGGQTMPGASSSLVVKFADSDKERTLRRMHQMAGQLGIFSPMTIQFGAYG
AYSQTQLMQQQAALMAAAQGSYLSPMAAIAAAQMQQMAAFNINGLVGTPMTPSSGTSTPP
GINATAVPSIATAIGVNGFSALPPQSNGQPASEPIYTNGIHPYPAQSPTVVDPLQQAYAG
VQHYAAAYPAAYAPISQAFPHQPAIIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPF
GNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMNGFQIGMKRLKVQLKRPKDANR
PY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtcaccgcgaacggattgcagcaggagaacggattcagcaccatgaacagc
tccggcaggatgaacgggctgagcatgggacagagtaccattccaatgaaggaccacgat
gccatcaagctgttcattgggcaaatccccaggaacctggaggagaaagatcttaaaccg
ctctttgaggaattcggcaagatctatgagctcaccgtgctgaaagatcggttcacgggg
atgcacaaaggatgtgcctttctaacatattgtgccagagagtcagccctgaaagctcag
agcaccctacatgaacagaagactcttccagggatgaacaggcccatccaggtgaaacca
gcagacagtgagggaagaggagaagacaggaagctgtttgtgggcatgctggggaagcag
cagagcgaggaagacgtgcggagactatttgaggccttcggtcagatcgaagagtgcacc
atcttgagggggcctgacggggccagcaagggttgttcctttgtgaagttctcctgccac
gcagaagcacaaactgccatcaacaacctacatggaggccagaccatgccgggggcctcg
tcgagcctggtggtaaagtttgcggacagtgacaaggagcgcacactgaggagaatgcac
cagatggccgggcagttgggaatcttcagccccatgaccatccagttcggggcctatgga
gcttactctcagacgcagctaatgcagcaacaggcagcactgatggcagcagcacagggg
tcctacctgagccccatggccgcgattgctgccgcacagatgcagcaaatggcagctttc
aacatcaacggcctggtggggacccccatgactccctcctcaggcaccagcacccccccg
gggatcaatgccactgctgtgcccagcatagcgacggccatcggggtgaacgggttcagt
gctctcccaccccagagcaacgggcagccagcctctgagccgatctacaccaatgggatc
cacccctacccagcacaaagtcccactgtggtggaccccctgcagcaggcttatgcaggc
gtgcagcactacgcagcagcctacccagcagcctacgctccaatcagccaggcgtttcca
catcaaccagccatcattccccagcaacagagagaagggccagagggctgcaatctgttt
atttaccacctgccccaggagtttggtgatgcagagctcatgcagatgttcctgccgttc
ggcaacgtcatctctgccaaggtgttcgtggaccgggccaccaaccagagcaaatgcttc
ggtttcgtaagctttgataacccttccagtgctcaggcagctatccaggctatgaatggc
tttcagatcggcatgaagaggctgaaggtgcagctcaagaggccaaaggatgccaaccgc
ccgtactga
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