Polyodon spathula (Mississippi paddlefish): 121294300
Help
Entry
121294300 CDS
T07273
Name
(RefSeq) unconventional myosin-Vc-like
KO
K10357
myosin V
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121294300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121294300
04131 Membrane trafficking [BR:
pspa04131
]
121294300
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121294300
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121294300
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121294300
mRNA cycle factors
P-body specific factors
121294300
Membrane trafficking [BR:
pspa04131
]
Others
Actin-binding proteins
Myosins
121294300
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121294300
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121294300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Csm1_N
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121294300
NCBI-ProteinID:
XP_041073821
LinkDB
All DBs
Position
19:complement(27433990..27457853)
Genome browser
AA seq
1743 aa
AA seq
DB search
MALAELYTKYNRVWIPDLGDVWKSAEITRDYKPEENVLELLLEDGTELKYPLDSVTKDLP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAINPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYF
ATVSKSGSKTHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMR
TYLLEKSRVVFQSENERNYHIFYQLCASANQPEFKNLKLVSADEFRYTCMGGKMYIDGVD
DRADMIETQRTFSLLGLKEDFQMDVFKVLAAVLHLGNVEIKGISDDRSSVNPSDKHLAVF
CGLLNISPDGVSRWLCNRKIITVSETVVKPMPKLRAINARDALAKQIYAHLFNCIIDRIN
KALQFPGKKHTFIGVLDIYGFETFETNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGKDENWLQKLYNNYLNKNPLFEK
PRMSNQSFVIQHFADKVEYRCHGFLEKNRDTMYEELIDILKASKFDLLANFFQEQEPTSP
FSKSINFKAATPGIKPSNKQLRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNEEKLQF
EYDSKRVVQQLRACGVLETIRISAQSYPSRWMYTEFYSRYSILMTQQEVTLNDKKQTCKT
VLQRLILDPNQYKFGRTKIFFRAGQVAYLEKLRSDRLRGACITIQKNLRGWTQRRKYLRM
REAAIIIQQYVRGKWAIRQTVSAATLKQGWAAIIIQKHCRGFLVRQVWQLIQVATVTIQA
FVRGWLARIRFKKILQEHKATILQKHARAWLARRRFQSIRRVVLNVQLSYRVQRLQKKLE
DQNKENHGLLERLTGLASAHSHDVDKLQKLEANLKISNAQKKMLEEDLKKNKEETKQVIT
QLQTHNANLTEEKLKLEKKLQEKSQEMKDNVDDIRKKLFEDLAGVERERKILENSFEVQK
DDYEKQIEALKEEMKCLREEKIQLQQQVQEESLINDGLKQDIAQLTNQAKVIPELRKEIA
VLETQKKEQDKQFKEQMQETRAKMSEVTRQLLGGLNKEELLSRLSKEDLEQINEDGELLF
AYEGLKKAIRVMENHFQAQQESYEKEIESLNYKAEHLQHETDHLQKLFREENNMKDNIRQ
EVKRLASENMAIPQYKQQISELQRKNQELKNRLKDQAIELRGNMEVITCELRNNLEEEGS
QRRILELQKETYEKEMQELQEKVAEKQDENDQLLKQFQAESQAKNKLRQEASRLIAENMD
FEEQVDMKDRLIRKLQNQIQAFRTIEKVNQVQEPVAPKEYLGMLEYKKDDESRLIKNIIL
DMKPRGVVVNMIPGLPAHILFMCVRHADYLNDADKLKSLMNAIINGVKQVIQEHPEDFET
LSFWLSNTCHLLNCLKQYSGEEEFMKHNSPHQNKNCLKNFDLSEHRQILSDLAIRIYQQF
ITVMESGIQPMIVPGMLEHESLQGISGMKPSGFRKRSASIYEDTEVYTISSILQQLGYFY
STMCQHGMDQELIKQAVKQLFYLITAVTLNSIFLRKDMCSCRKGMQIRCNISYLEEWLKE
KNLQGSCAIDTMEPLCQTAWLLQVNKSTDEDAKEICERCSGLSAVQVVKILNSYTPIDDF
EKRVAPSFVRKVQSILQGNEGSAQLMLDSKYLFQVTFPFSPSPQALEVIQVPSSLKVGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggctctggcggagctgtacaccaagtacaacagagtgtggatccctgatctaggagat
gtctggaaatcagctgagatcaccagagattacaaaccagaggaaaatgtgcttgaactg
ctattggaagatggcacagaattaaaatacccccttgattcagttaccaaggacctgccc
catctacgtaaccctgacatccttgttggtgaaaatgacctcactgccctcagctacctc
catgagcctgcagtcctgcataacctcaaagtgcgctttgtggaatccaagattatctac
acctactgtggtattatacttgtggccattaatccgtacaaacaactgcctatctatgga
gatgccatcatacatgcatacagtggccaaaatatgggagatatggaccctcacatattt
gctgtagcagaggaggcatacaaacagatggccaggaataataagaaccagtctattata
gtaagtggggaatcgggagctggaaagaccgtgtctgctcgctatgccatgagatacttt
gccactgttagtaaatctggcagtaagacgcacgtggaagataaagtcctggcatcaaac
ccaataacagaggctatcggcaatgctaaaacaacaagaaatgacaatagtagtcgattt
ggaaaatacactgaaatcagttttgaccgacgctatcagatcatcggagcaaacatgaga
acgtatctgctggaaaaatcaagagtcgttttccagtcagagaatgagagaaactaccat
atattctaccagctctgtgcctctgcaaaccaaccagagttcaagaatttgaagctggtt
agtgctgatgaatttagatatacctgcatgggtggcaaaatgtacattgacggagtggat
gacagagctgacatgattgaaacccagaggactttctcgctgctaggtttaaaagaggac
tttcagatggacgtatttaaggtgctggcagcagtcctacatttaggcaatgtagaaatc
aaaggcatcagtgacgacaggtcttctgtcaatccgagtgacaaacacctggctgtgttc
tgtggtctactcaacatcagccctgatggagtgtcccgctggctgtgcaatcggaaaatc
atcacggtctctgagactgtggtgaaacccatgccaaagctgcgagccatcaatgccagg
gatgccctggccaaacagatctatgcccacctgttcaactgcatcatcgacagaatcaac
aaggctcttcagtttcctgggaagaagcacacctttattggagttttggacatttacggg
tttgaaacatttgaaaccaacagttttgagcagttttgcattaactatgccaatgaaaaa
ctgcaacagcagtttaacctgcatgtctttaaactggaacaagaagaatacatgaaggag
gacattccctggacgctgattgatttctatgacaatcagcctgtcattgacctcattgaa
gcgaagatgggtatcttggatttgttagatgaagagtgcctgtttccacagggcaaagat
gagaactggcttcagaagctgtataacaattatctgaacaagaaccctctgtttgagaag
ccaaggatgtcaaaccagtcgtttgtaatccagcactttgctgataaggtggaatacaga
tgccacggatttctggagaagaacagagatacaatgtatgaagagctgattgacatactg
aaggccagtaagtttgatctccttgcaaacttctttcaagagcaagaaccaacttctccc
ttcagtaaaagcattaacttcaaagctgccacacctggaataaagccctcaaacaaacag
ctccgtacgacagttggcaacaagttccgcagctctctgtacttgttaatggagactctg
aatgccacaacgcctcactatgtacggtgcataaaaccgaatgaagaaaagctccaattc
gaatatgattcaaagagggtcgtgcagcagttgcgagcttgtggggttcttgaaaccatt
cgtattagtgctcaaagctatccatcaaggtggatgtatactgagttttacagtcgctac
agcattctaatgacacagcaagaggttacactgaacgataagaaacagacttgcaagact
gtgctgcaaaggttaattctcgatcccaaccagtacaagttcggcagaacgaagatcttt
ttccgagcaggtcaggtggcgtacctggagaagctgcgatcagaccggctgcgaggagcc
tgcattacgatccagaagaacctccgaggctggacccagcgcaggaagtacctccgcatg
agagaggccgccatcatcatccagcagtatgtgcgaggcaagtgggcaatacggcaaaca
gtgagtgccgctaccttgaagcagggctgggcagccatcattatccagaagcactgccgg
ggcttcctggtacgccaggtctggcagcttattcaggttgccacggtgaccatccaggcc
tttgttcggggatggcttgctcgaatacgattcaagaagattcttcaggaacacaaggct
acaatcctgcagaagcatgcgcgagcctggctagccagacgcaggtttcagagcattcgg
agagtggtgctgaatgtgcagctctcttacagagtgcagcgactgcagaagaaactggag
gaccaaaacaaagagaaccacgggttactggagaggctgacaggactggccagcgctcac
tcccacgatgtagacaagctgcagaaactggaagccaatcttaagatatccaatgcacag
aagaagatgttagaggaagacttgaagaaaaataaggaggaaaccaaacaggttataact
cagctacaaacccacaatgccaaccttactgaagagaagctgaaactggagaaaaagctc
caagagaagtctcaggaaatgaaagataatgtagatgacatcaggaaaaaactcttcgaa
gatctagcaggagtggaacgggaaagaaaaatcctggagaatagctttgaggtccaaaag
gacgactatgagaagcagatagaagccctgaaagaggagatgaagtgtctgagagaggag
aagattcagctgcagcagcaggtccaagaagagtccctcattaatgacggactcaagcag
gacatcgcccagctcacaaaccaggccaaggtaatcccagagctgcggaaagagattgcg
gttctggagacacagaaaaaagagcaggacaagcagttcaaagaacaaatgcaggaaacc
agagcgaaaatgtcagaggtgacaagacagcttcttggaggactgaacaaggaagagctg
ctttccagattatcaaaagaggatctggaacaaatcaatgaagacggagagctactgttt
gcttatgaaggtctgaagaaagctatcagggtgatggagaaccatttccaagcacagcaa
gagagctacgaaaaagaaatcgagagcctaaactacaaggccgagcatctccagcatgag
acagatcatttgcaaaaactgttcagagaagagaacaacatgaaagacaacatccgtcag
gaggtcaaacggctggcctctgaaaacatggcgattccgcagtataaacagcaaatatcc
gaactacagaggaaaaaccaagagctgaaaaaccgcttgaaggaccaggctatagaactg
agagggaacatggaagtaatcacttgtgagctgcgcaataaccttgaagaagaaggctca
cagcgaagaatactggagcttcagaaagaaacctatgagaaggagatgcaggagctgcaa
gagaaggttgcggagaaacaggatgagaacgaccagctgctgaaacagttccaagccgag
agccaagccaaaaacaagttgcgacaagaagcctcgcgactgattgccgaaaacatggac
tttgaagaacaggttgatatgaaagacagattgataaggaaacttcaaaatcaaatacag
gccttccggacaattgagaaagtaaatcaagtccaagaaccagttgcaccaaaggaatac
ctcggaatgctggaatacaaaaaggatgatgaatcaaggctaattaaaaacatcattctg
gatatgaagccccgaggcgtggtggtgaacatgatcccaggcctgccagcgcacatcttg
ttcatgtgtgtgaggcatgccgattacctcaacgacgcagacaagctgaagtcattgatg
aacgcaatcataaacggggttaagcaagtcattcaggagcaccctgaggattttgagacg
ttgtcattctggctctccaacacatgccacttgctgaactgcttaaagcaatacagtggg
gaggaggaatttatgaaacacaatagtccacatcagaataagaactgtctgaagaatttc
gacctgtctgagcacaggcagatactcagtgacctggccattcgcatctatcagcagttc
atcaccgtcatggagagcggcattcagccaatgattgtgcctggaatgctggagcacgag
agtctccaaggtatttccggtatgaaaccctcagggttccgcaagcgttccgccagtatc
tatgaagacacggaggtgtacaccatctccagcatcctgcaacagctgggctacttctac
agcaccatgtgtcaacatggcatggaccaggagctgatcaagcaagccgtgaagcagctc
ttctatctcatcacagccgtcacgctgaacagcatcttcctccggaaagacatgtgctcc
tgcagaaaaggaatgcagatcaggtgtaacatcagttacctggaagaatggctaaaggag
aagaatcttcagggcagctgtgccatagacacaatggagcctctttgtcagacggcctgg
ttacttcaggtcaacaaatcaacagacgaggatgccaaggaaatatgtgaaagatgttct
gggctttctgctgtccaggtagtaaagattctcaactcgtacacacctatagatgatttt
gagaagagggtagctccatcatttgtacgcaaagttcagtccattttgcaggggaatgag
ggctctgcacagctgatgctggacagcaagtatctcttccaagtcacctttccttttagt
ccctccccacaagcactggaagtgatccaggttcccagcagcctcaaagtgggattccta
actcgaatctga
DBGET
integrated database retrieval system
