Polyodon spathula (Mississippi paddlefish): 121294329
Help
Entry
121294329 CDS
T07273
Name
(RefSeq) very long-chain acyl-CoA synthetase-like
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121294329
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121294329
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121294329
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121294329
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121294329
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121294329
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
121294329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121294329
NCBI-ProteinID:
XP_041073868
LinkDB
All DBs
Position
19:26344069..26350646
Genome browser
AA seq
460 aa
AA seq
DB search
MFVFCILILLLSLTELKGAVEDVLPSLQQQKVSVFILSEESTTPGIESLNGKIHQASDQP
LPVSLRSNVTMKSIAVYIYTSGTTGLPKAAVITQEWVWASAFFHICGVNSEDVLYLNLPL
YHSSGFLMGLTGALGKGITIVLGRKFSASQFWDDCRKHNVTVIQYIGEVLRYLCNTAQKD
SDRDHKVRLAFGNGARADTWKEFLKRFGAIRICECYGATEGNVSSVIYVGKVGAIGREMF
IHKKLFPYELIQYDTEIEKPVRVSQGFCVPAPKGATGLFVTKITRIAPFNGYARNPQQTD
KKKLRDVFKKDIYFNSGDLLMVDQDNFVYFQDRIGDTFRWKGENVATTEVSVSLFLSADH
EGRIGMAAVKLEEAKQLECDKIYSHVVCYLPSYARPRFLRIQDSLEVTGTFKQLKVELAG
EGFNPAIVQDPLYFLDKNEKTYVPMTQEMYNAIISKHVRL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcttctgcattcttattcttctgctttcattgacagagctgaaaggtgctgtt
gaagacgtgcttccttcgctccaacagcagaaagtgtctgtttttatcctgagtgaagag
tccaccacaccggggatcgaaagccttaatggcaagattcatcaggcttctgaccagcca
ctaccagtgtctctgaggtccaatgttaccatgaaaagtattgcagtatatatctacacc
tctggcacaacaggccttcccaaggctgctgtcataacacaggaatgggtctgggcttcg
gctttttttcacatctgtggcgtgaactcggaagatgtcctctaccttaatttgcctctc
taccacagctcagggtttttgatgggactgacgggagccttaggaaaaggtataaccatt
gttttagggcgcaagttttcagcctctcagttttgggatgactgtcggaagcacaatgta
acggttatacagtacatcggagaggtgctgcgctatctctgcaacactgctcaaaaagac
agtgatcgggatcacaaggttaggcttgcttttggcaatggtgccagagcagacacctgg
aaggagtttttaaagcgttttggagctattcgaatctgtgaatgttacggtgcaactgag
gggaatgtgagctccgtcatctatgttggaaaggtcggtgctattggacgggagatgttt
attcacaagaaactcttcccctacgagctgattcagtacgacaccgagatagaaaagcct
gttcgggtctcccaaggtttttgtgtcccggctcccaaaggggcgactggcctgttcgta
acaaagatcaccagaatagctccttttaatggatatgcaagaaacccgcagcaaactgat
aagaagaagctgagagacgtcttcaagaaagacatctacttcaacagcggggacctgctg
atggtggaccaggacaactttgtgtactttcaagacaggattggagacacattcagatgg
aagggggagaacgtggccaccacagaagtctccgtatcactgtttttgtctgcagatcat
gaagggcgaataggaatggctgctgtgaagctagaggaggctaaacaacttgagtgtgac
aagatctacagccacgttgtctgctatctgcccagttatgctagaccacgctttcttaga
attcaggactctttggaggtcactggaacattcaaacagttgaaagtcgaattagcagga
gagggttttaatccagctatagtccaggatccactgtactttctggataaaaatgaaaag
acatatgtaccgatgactcaggaaatgtataacgccatcatttcaaaacatgttaggcta
tga
DBGET
integrated database retrieval system
