Polyodon spathula (Mississippi paddlefish): 121294354
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Entry
121294354 CDS
T07273
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1-like
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121294354
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121294354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
PH_11
EGF1_RECK
MYO6_lever
PH_13
IQ
Motif
Other DBs
NCBI-GeneID:
121294354
NCBI-ProteinID:
XP_041073913
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All DBs
Position
19:complement(33176133..33219364)
Genome browser
AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVTYLGILAKKDGTRRGYLSKKSSDNTKWHTKWFALLQNMLFYFENDSSS
RPAGLYLLEGCACDRAPSPKPSLSAKECLEKQYYFTVNFNHDNQKALELKTEDVKDCDEW
VAAITHASYRNLATEHESLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEVERLKAEIGG
LLKDNERIQSDPTTAPSDDDSDIKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPSITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLEYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQIPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVMSLIDCTLMEEPEGTDEESKPDK
SGQDMEHLDFKIVVEPKDTQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFEE
NSKVTVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTAEVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPKSPRAS
RKFSSPPPLSITKSSSPNRQRKLSLNIPIITGGKALDLAALSCSSNGYASMYSSMSPFSK
TSLDINKLYVSSSIPSKILDEAETKTDKPDEPSSNKQEVSVREECDNDPIQSDEAETETS
PTKSPTTPKNVKCKNSSDFSLFSYNNGVVVTSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLATTGYPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHAQDFESNGELKF
KVISFLEEVIHDPELLTQERKAAANIIRTLTQEDPGDNQITLEEIVQMAEGVQSEPFDNH
SALEVAEQLTLLDHLVFKGIPYEEFFGQGWMKPDKNERTPYIMKTTKHFNHISNLIASEI
LRSEDVNVRVTAVEKWVAVADICRCLHNYNAVLEITSSLNRSAIFRLKKTWLKVSKQTKA
LIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDGLVNFSK
MRMISHIIREIRQFQQTAYKVEHQPKTTEYLLDNSAVLDEESLYEASLRIEPKLPT
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggaattcgactcaatgatggccatgttacctacctgggtattttggcgaaa
aaagatggcactagacgagggtatttgagcaagaagagctccgacaacacaaaatggcat
accaagtggttcgctttgctgcagaatatgttgttttattttgagaacgactccagctcc
agacccgcgggattgtatctgttggaaggatgcgcttgtgacagagccccctctcctaaa
ccttctctgtcagccaaggaatgtttagagaagcagtactacttcactgttaacttcaac
cacgacaaccagaaggccctggagctgaagacagaggatgtcaaagattgtgacgaatgg
gtggcagcaataacacatgcaagctacaggaaccttgcgacggagcatgagtcgctcatg
cagaagtacctccatttgctgcagattgtagagacagagaaaacagttgctaagcaacta
cgacaacagatagaagatggggaaatagaggttgaacgcctgaaagccgagattggaggt
ttgctcaaagacaacgagcgcattcagtctgacccgactactgcacccagcgacgatgac
tctgacatcaagaaaatcaaaaaggtacagagtttcctccggggctggatgtgtcggagg
aagtggaagacaatcattcaggactacatcaggtctccccacgccgagagcatgaggaag
aggaaccaggtggtgttcagcatgctggaggcagaggctgagtacgttcagcagctgcac
atcctggtcaacaacttcctgcggccgctgcgtatggctgccagctccaagaaaccttcc
atcacccacgacgacgtcagcagcatattcctgaacagtgaaacaatcatgtttttgcac
cagatattttaccaaggactaaaagcaagaatagcaagctggccaacgctagtactagct
gacctctttgacatcctgctgcccatgctgaatatttaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggcacactgcaagcagaaccgagacttcgacaagctgctc
aagcaatacgaggccaagcccgactgtgaggaaaggactctggaaaccttcctgacctac
cctatgtttcagatccccaggtacatcctgacgctgcacgagctcctggctcacaccccg
catgagcatgtggagaggaacagcctggagtatgccaagtctaagctggaggagctctca
agaatcatgcatgacgaagtgagcgagacggaaaacatccggaagaacctggccatcgag
cgaatgatcgtggaagggtgcgagatcctcctcgataccagtcagacctttgtcagacaa
ggttctctcatccaaataccaatgagtgaaaaggggaaaatcaccagagggaggctgggg
tccctgtctctcaagaaggaaggggaaaggcagtgctttctgttctccaaacatttaatc
atctgtaccagaggatcgggagggaaactccatttaacaaagaacggagtgatgtcactc
attgactgcaccttgatggaggagccagagggcaccgatgaggagtcaaaaccagacaaa
tccggacaagacatggagcacttggacttcaaaatcgttgtcgaaccaaaagacacgcag
tcgttcactgtcatcctggtggcgtcctcacgtcaagagaaatccgcgtggacaagcgat
atcagccagtgcatagacaatatcagatgcaatggtttgatgatgaatgcattcgaagaa
aactcaaaagtgacagttccacagatgatcaagtccgacaccagcctgtactgtgatgac
gttgacattcgcttcagcaagatgatgaactcctgcaaggtcctgcagatccgctatgca
agcgtggagcggcttctggagagactgacagacctgaggtttctcagtatagactttctc
aacaccttcctgcattcatacagggtgttcaccacagccgaagtggtgctggacaagctc
atcaccatttacaaaaaacctatcagtgcaatacctgcaaggtctctggagctgtttttc
gcaagcagtcaaaacaataagcttctgtatggagagcctccgaagtccccaagggccagc
cgcaagttctcctcccctccccctctgtccatcaccaagtcatcgtcccccaaccgccag
aggaaactctccctgaacatccccatcatcaccggaggcaaggcgctggatctggctgcc
ctgagctgctcctccaatggctatgcaagcatgtactcttccatgtccccattcagcaag
accagcttggacatcaacaagctgtacgtgtccagctccatccccagcaagatcctcgat
gaagctgaaaccaaaacggacaagccagacgagccttcctccaataagcaagaagtatcg
gtcagagaagaatgtgacaatgacccaatccagagtgacgaagctgaaacagagacgtca
ccaacaaagtctccgacaactcccaaaaacgtgaaatgcaaaaactcttcagacttctcc
ttgttttcctataacaatggcgtggtggtgacatcctgccgagagcttgacaacaatcgc
agtgcgctgtcggctgcctctgctttcgccatagcaacagcgggggccaatgaaggcacg
cccaccaaggaaaaatacaggaggatgtcactggcaactacagggtaccccactgatcag
aggaacggggacaaagagtttgtgatcaggagagctgcgacgaaccgagtcctgaacgtt
ctgcgacactgggtctccaaacatgcacaggactttgaatccaacggtgaattgaagttt
aaggtgatcagcttcctggaggaggtgattcacgaccccgagcttctgacccaggagagg
aaagcagctgccaacatcatcagaactttaactcaagaagaccccggagacaatcaaata
accctggaggagattgtgcagatggcggaaggtgttcaatctgaaccgtttgataaccac
tctgccctggaggtcgctgagcagctgaccctgctggaccacctcgttttcaagggaatc
ccgtacgaggagttttttggtcaaggttggatgaagcctgataaaaacgagaggactccc
tacattatgaaaaccaccaaacacttcaatcatatcagcaacttgatagcctcagagatt
ctgcggtcggaagacgtgaacgtgcgtgtgacagcggtggaaaagtgggtggccgtggct
gatatctgccgctgtctgcacaactacaatgctgtgctggagatcacctcctcgctgaac
cgcagcgccatcttcaggctgaagaaaacctggctcaaagtctccaagcagacaaaagct
ctgattgacaagttacagaagctggtctcatccgagggcaggtttaagaacctccgagag
gctttgaaaaattgtgatcctccgtgtgtgccgtacctgggcatgtacctgacagacctg
gccttcatcgaggagggcacacccaactacactgaggacgggctggtcaacttctccaaa
atgaggatgatctcccatattattagagaaatcaggcagttccagcagacagcctacaaa
gttgaacaccagcccaagacaacagagtatttgctggacaatagtgctgtgctggatgaa
gaaagtctttatgaagcctctctgagaatagagcccaaattgcctacctga
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