Polyodon spathula (Mississippi paddlefish): 121294386
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Entry
121294386 CDS
T07273
Name
(RefSeq) 43 kDa receptor-associated protein of the synapse-like
KO
K24924
receptor-associated protein of the synapse
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121294386
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
121294386
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Gene cluster
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_1
TPR_2
TPR_MalT
TPR_8
zf-RING_2
zf-RING_5
zf-RING_11
DUF3856
TPR_10
SNAP
TPR_19
zf-RING_Vps41
ARM_TT21_4th
Prok-RING_4
zf-RING_UBOX
zf-C3HC4
PCYCGC
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121294386
NCBI-ProteinID:
XP_041073949
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Position
19:2136666..2148655
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AA seq
419 aa
AA seq
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MKRFGVEMGQDQTKQQIEKGLLLYQSNYTDKALHIWFKVLEKTSDPGGKFRVLGCLITAH
SEMGKYRDMLQYALNQIDTAREMEDPDYLMEAYLNLARSNEKLCDFQKTISYCKTCLNMQ
GTTTSLLLNGQVCLSMGNAFLGMSVFQKALENYEKGLRYAHNNDDKMLECRVCCSLGNFY
TQLKDYEKALFFPCKAAELVNDYGKGWSLKYRAMSQYHMAVAYRKLGRLLEAMDCCEESM
KIALQHGDRPLQSLCLLCFADIHRSRNDVEKALPRYESSMCIMTETGNRLGQVHVYLGVA
KCWLMQKELDKALDTVQRAQELAEDLGNKLCILKAHCLNEGIFRSKEQQTELREQVVKFH
ECVEEMELYCGMCGESIGEKNHQLQALPCSHVFHLKCLQSNGTRGCPNCRRSSVKPGYV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctttggagtggaaatgggccaggatcaaaccaagcagcagattgagaagggg
ctccttctctaccagtccaactacaccgacaaggcgcttcacatctggttcaaagtactg
gaaaagacctctgatcccggagggaagttcagggtcctgggctgtctgatcactgcccac
tctgagatgggcaaatacagggatatgctccagtatgcgctgaaccagatagacacagcc
cgtgagatggaggacccagactacctgatggaggcctacctgaacctggcacgcagcaac
gagaagctctgcgacttccagaagaccatctcctactgcaagacctgtttgaacatgcag
ggcaccaccaccagcctgctgctcaacgggcaggtgtgcctcagcatgggcaacgccttc
ctgggaatgagcgtcttccagaaagcgctggagaactacgagaaaggcctgcgctacgca
cacaacaacgatgacaagatgctggagtgcagggtctgctgcagcctggggaacttctac
acccagctcaaggactatgaaaaggcgctgttcttcccctgtaaagctgcagagctcgtg
aacgactacggaaagggctggagtttgaagtatcgggcgatgagccagtatcacatggca
gtggcatacaggaagctggggcgcctactagaggcgatggactgctgtgaggaatcaatg
aagatcgccctgcagcatggtgatcggccactccagtctctttgcttgctgtgcttcgct
gacatacaccggagcagaaacgatgtggagaaagcactccctcgctacgagtcgtccatg
tgtataatgactgagaccggtaatcgtcttgggcaggtgcacgtctacttgggcgtggcg
aagtgctggcttatgcagaaggagctcgacaaggctctagacactgttcagagagcacaa
gagttagcagaagacttgggaaataagctgtgcatcctgaaggctcactgcctgaacgag
ggcatcttccgctccaaggagcagcagacggagctgcgggagcaggtggtgaagttccac
gagtgcgtggaggagatggagctctactgtgggatgtgtggggagtccatcggggagaag
aaccaccagctgcaggcgctgccctgctcccacgtattccacttaaaatgcctacagtcc
aacgggacgcgaggctgcccaaactgtcgccgatcgtcagtgaaacctggctatgtgtga
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