Polyodon spathula (Mississippi paddlefish): 121294433
Help
Entry
121294433 CDS
T07273
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121294433 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121294433 (dysf)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Ferlins
121294433 (dysf)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121294433 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
PTEN_C2
PapD_C
Motif
Other DBs
NCBI-GeneID:
121294433
NCBI-ProteinID:
XP_041074050
LinkDB
All DBs
Position
2:complement(24462779..24582850)
Genome browser
AA seq
2152 aa
AA seq
DB search
MLRCVLQRASHLPNVEKGARQSDPVASLTFRGSKKKTKVIKNNLNPVWNEGFEWDLKGVP
LDTSAEMRVVVKDHEKMSRNRFLGEATVSLRDVLSSHNLTASYNVPLLDNKKQSTGATLN
LQVSYIAPPGTAPVSPPPAPPEAQHASAELDTVTDTGGEEETEDQVEIAEEAEPAVVTPG
QEPPALPKKNSMLPVHGIKKKRRSAKEPLSNKPQDFQIRVQVIDGRQLPGVNLKPIVKVT
VAGQTKRTRIRKGNNPSFDETFFFNFFESPSELFDEPIFITVFDSRSLRTDSVIGEFKLD
VGTVYAQPKHAFIRKWLLLSDPDDISAGVKGYLKVSLCVLGVGDEAPTEKKEVTEDKEDI
EGNLLRPAGLALRGAQFTLKIYRAEDLPQMDDAFLDGMKQVFGFDSNKKNLVDPLVEVCF
AGKTLSSKILEKNANPQWNQSLTLPIRFPSMCEKMRIRLIDWDRASHNDVIGTAFLCMSK
ISAPGGDLEDDFPPKTFSKNSFDDSLGFLPTFGPCYINLYGSPREFTTFSDPYEPLNLGK
REGVAYRGRVLVELDTKLVERVEQRVEDIPADDLLVVEKFMRKRKYCLFASFYSATLLQD
VDDAIQFEVSIGNYGNKFDNTCLPLASTTQYSCAVFDGCHYYYLPWGNVKPVVVLSSEWE
DIKPRIDSLNMLLCMVDRLEANLEQVHLAIKANSSLEDVYSKVAQLLDDVISDSSLELPD
IQQWPCATPLDKYIHRFRRINLSQMEQVALQLKHGENTELSTVLEQAEDWLLRLRGMAEE
PQNSMPDIVIWMLQGDRRVAYYRIPAHEVLYSRSKGGANYCGKHCGQLQTIFMKSPQSEG
KQFKIPAQVRVRVWFGLSADVKEFNQYAEGKLSVFAETYENQTKLALVGNWGTTGLTYPK
FTDITGKIKLPKDSFHPSPGWTWVGEWFISPEKTLLYDADAGHMTFMEEVFENHMRLPGG
QWIGMPEGYTDVNGEKALPKDDIESPPGWVWVDEEWSKDLNRAVDDGGWEYGITIPPDRK
PKSWVPAEKMYHTNRRRRWVRLRRRDLKQTEALRKQRPGELEREGWEYASLFGWKFHLKQ
RKTDSFRRRRWRYRMEPLEKTGPAAVFALEGSLGGVMDEKNDDKSVTASFGVNRPTISCM
FDSGTRYHLRCYMYQARDLIAMDKDSFSDPYAIVSFLHQSQKTVTIRNTLNPTWDQTLIF
YEIEIFGDPQVTEENPPNIMVEIYDQDTYGADEFMGRCVCRPSLEPSPRLAWYTVTRGSK
NTGELLAAFELIRRETPAVHHIPGLEGEFTPTDTLDELCLPGFFFENLQQWPADTDLPIP
PPQREPNIYMLPKEIKPVLQLTAIEILAWGVRNLKSFQLASVASPSLQVECGGQMVQSCV
IRSAKKKPNFDINVLFMEVCLPTEELYSPPIIVKVIDNRQFGRKPVVGQCTIKDLKQYHC
DPDRLERESIDYQADEISLTPRDDVLIDIDDKQPLIPRQYRYSRWWLKKKSLLADGMTSS
AIINLSSSRSSLHKIIWEEEFMDWWSKFYASTGERTKCGTYMEKGFDTLQVYDKELEKVE
EFEGLADFCQTFKLYRGKSQDDNEDPSVVGEFKGMFKIYPLPDDPSLPVPPRQFRQLPPN
GIEECLVRVYVVQATGLQPKDSNGKCDPYVKISLGKKSVNDQDSYIPCTLDPVFGKLFEL
TCALPLEKDLKIALYDYDLLSKDEKIGETVIDLENRFLSKYGGRCGLPQSYCLSGINQWR
EQLKPSQLLHRFCEQRNYKLPVYKHDRVLFRGHEYTLSDLEDVKLPNPHLGPPGERLALY
ILRKQGLVPEHVETRPLYSPLQPEIEQGRLQLWVDMFPKSLGPPGPPFNITPRKAKRFYL
RCVIWNTSDVILDDVSVTGEKMSDIYVKGWMLGYEENKQKTDVHYRSLGGEGNFNWRFIF
PFNYLPAEQVCTFNKKEHFWSLDKEETKTSPKLMIQIWDNDKFSFDDYLGSVELDLNKMV
RPSKSPEKCTLDMLEQSLCPEKLVSLFEQKTMRGWWPCVGESNGEKIIAGKVEITLEIVS
EQERDEKPAGLGREEPNMNPKLEDPKRPETSFLWFSSPFKTMKYILWRRFKWIIIAVIII
VILLLFLGVFLYSFPNYAAMKLVGPFAKREAVETLRPIERRGGEEPLTSLGG
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtgtgttcttcagagagccagccatctccccaatgtggagaagggagccaga
cagagcgaccctgttgctagcctaacatttcgagggtctaagaaaaaaactaaagtcatc
aagaataacttgaatccagtctggaatgaggggttcgaatgggacctgaagggggtcccg
ctggacaccagcgccgagatgcgcgtggtggtgaaggaccatgagaaaatgagcaggaac
cggtttctgggagaagctactgtgtccctccgagatgtgctcagttcacacaacctgact
gccagttacaatgtgcctctactggacaacaagaaacagagcacaggggccacactcaac
ctgcaggtttcctacatcgctcccccagggacagctccggtatctcccccccctgctccc
cccgaggcccagcatgcttctgctgagcttgacactgtcacagataccggcggtgaagag
gagacagaggaccaggtggagattgctgaggaggcagagccagctgtggtgacgcctggg
caagagccccctgctctgcccaagaaaaactcaatgctccctgtccatggcatcaagaag
aagaggaggagtgccaaggagccgctctccaacaaaccacaggacttccagatcagagtt
caggtcatcgatggcagacagctcccaggagtcaacctcaaacccattgtcaaggtcact
gtcgccgggcagacaaagagaaccaggattagaaaaggaaacaatccctcctttgatgag
accttcttctttaacttcttcgaatctccatctgaactctttgatgagccaatctttatc
actgtttttgattctcgctctcttcgcactgattcggttattggagaatttaagcttgat
gtgggaacagtatatgcacagccaaagcatgccttcatcaggaagtggctcctactctct
gaccccgatgacatttctgctggggtcaaaggttacctaaaggtcagcctctgtgtgctg
ggtgtcggggatgaggcaccgacggagaagaaagaggtgacagaggacaaagaggatatc
gaggggaacctgctccggcctgcaggcctggctctgagaggagcacagttcacactcaag
atctacagagctgaggacctgccacagatggatgatgcattcttagacgggatgaaacag
gtctttggatttgacagcaacaagaagaatcttgtcgatcccctggttgaagtctgcttt
gctggaaagacgctctccagtaagatccttgagaagaacgccaacccgcagtggaaccag
agtctaactctacccatcaggtttccttctatgtgtgagaaaatgagaatccgcctaata
gactgggacagagcgagccacaatgatgtcattggtaccgccttcctctgcatgtctaaa
atttcagcacctggcggagatctagaagatgattttccaccgaagaccttcagcaaaaac
agcttcgatgacagtctggggttcctgccaacctttggcccctgctatatcaacctgtac
ggaagtccgagggaattcaccacgttttctgatccctacgagccactgaacctggggaag
agggagggagtggcttaccgaggaagggtgctggtggagctggacaccaagctggtggag
cgcgtggagcagagggtggaggacatccctgcagacgacctgctggtggtggagaagttc
atgcgaaagcgtaagtactgcctgtttgcttccttctactcggccaccttgctgcaggat
gtggatgatgccatccagttcgaagtcagtattggtaactatggcaacaagttcgacaac
acctgcctgccactggcctcaactacgcagtacagctgcgctgtgttcgatgggtgccat
tactactacctgccctggggaaatgtaaagccagtggtggtgttgtcatcagagtgggag
gatatcaagcctcggatcgactccctgaacatgttgctgtgcatggtggacagactggaa
gccaacttggagcaggttcatctggccatcaaagccaacagctccttggaggatgtgtac
agcaaggtagcacagctcttagatgatgtcatcagcgactccagcctcgagcttccagac
attcagcagtggccgtgcgcgacccctctggacaagtacattcaccgcttccgcaggatc
aacctttctcagatggagcaggtagccctgcagctaaaacatggagagaacacagagctg
agcaccgtgttggagcaggctgaggactggctgctgagactgcgaggcatggctgaggag
cctcagaacagcatgccggacattgtgatctggatgctgcaaggagaccggcgtgtggct
tactaccgcatccctgcccatgaggtcctgtactccaggagcaagggtggagccaactac
tgtggcaagcactgcggccaacttcagaccatatttatgaagtctccacagagtgagggt
aagcagtttaagatccctgcacaggtgcgggttcgagtgtggttcggcctgtctgcggat
gtgaaggagttcaaccagtacgcagaagggaagctctctgtgtttgcagaaacgtatgag
aaccagaccaaactggcgctagttggaaactgggggaccactggcctgacgtaccccaag
ttcacagacatcactggcaaaatcaaactgcccaaagacagcttccacccctcccctggg
tggacctgggttggagaatggttcatcagtcctgagaagacgcttctttatgatgctgat
gccggtcatatgactttcatggaggaggtgtttgagaatcacatgcggctgccaggggga
cagtggatagggatgccagaaggctacaccgatgtgaatggagagaaggcgctgccgaag
gatgacattgagtccccacctggctgggtgtgggtggatgaggagtggtctaaagatctc
aacagagctgtcgatgacggaggttgggagtatggcatcaccatccctccagaccgcaag
cccaagtcgtgggtgccggctgagaagatgtaccacaccaaccgccgccgacgctgggtc
aggctgcgccggagagacctcaagcagacagaggcgctgaggaagcagcggccgggtgag
ttggaacgggagggctgggagtatgcctctctcttcggatggaagttccacctgaagcag
cgcaagactgactccttccgccgccgccgctggaggtaccgtatggagccgctagagaag
acaggccccgctgcagtcttcgcgctcgagggctcactgggaggagtgatggatgagaag
aatgacgacaaatcagtgactgcaagctttggagtgaatcgacccaccatctcctgcatg
ttcgatagtgggactcgttaccatctgcgttgctacatgtaccaggctagagaccttatt
gccatggacaaagacagcttctcggatccctacgccattgtgtccttcctccaccaaagc
cagaaaacagtgaccattcgcaacaccctcaaccccacctgggaccagaccctcatcttc
tacgagattgagatctttggtgacccccaggtgaccgaggagaacccccccaacatcatg
gtggagatctacgatcaggacacctatggtgctgatgaattcatggggcgctgtgtgtgc
cggcccagcctggagccctctccacgactagcctggtacacagtgaccagggggagtaag
aacactggggagctgctcgccgcttttgagctcatccgcagagaaacgcctgcagtccat
cacattccaggcctcgagggggagttcacacctaccgatacactggacgagctgtgtctt
ccagggttcttctttgagaatctccagcaatggccagcggacacagacctgcccattccc
cctccgcagagggagcccaacatctacatgttgccaaaggaaattaagcctgtactgcag
ctcactgccatcgagatcctggcctggggtgtgaggaacctgaaaagcttccagctggcg
agtgtggcctcgcctagcctgcaggtggagtgcgggggtcagatggtacagtcctgcgtc
atccgcagcgccaagaagaaacccaactttgacatcaatgtactcttcatggaagtgtgt
ctgcccacagaagagctgtactctccacccatcatcgtgaaggtcattgataacaggcag
tttggcaggaagcctgtggtggggcagtgcactatcaaggacctgaagcaataccattgc
gaccccgacaggctggagagggaatccattgactaccaagcagatgaaatcagtctcacc
cctcgtgatgatgtgctgatagatatcgatgacaaacagcctctcattccaagacagtac
cggtattccagatggtggttgaagaagaaaagtctacttgcagacggcatgacgagctca
gcaattattaacctctcatcctctcggtccagcctccataaaatcatctgggaagaggag
ttcatggactggtggagcaagttctatgcctccactggtgaaagaaccaagtgtggaacc
tacatggagaagggcttcgacacacttcaggtgtatgacaaagagttagagaaggtggag
gagttcgaggggcttgctgatttctgccagacctttaaattgtacagaggcaagtctcag
gatgacaatgaggacccgtcagtggtgggagagtttaaggggatgtttaagatctacccg
ctgcctgatgacccatccctgcccgtcccacctcgccagttcagacagcttcctcccaat
ggcattgaggagtgtctcgtcagagtctacgtggtgcaagccactggcctgcagcccaag
gacagcaacggcaagtgtgacccctatgtcaagatctctctgggcaagaagtctgtcaat
gaccaggacagctatatcccctgcacgctggaccctgtcttcggaaagctgtttgagttg
acatgcgcgctgccgctggagaaggacctgaagatcgcactgtacgactatgacctgctc
tctaaggacgagaagatcggggagactgtaattgacctggagaaccgcttcctctccaaa
tacgggggccgctgcgggctgccgcagtcatactgcctgtcagggataaaccagtggcga
gagcagctcaaaccgtcccagctgctgcaccgcttctgtgagcagagaaactacaagctg
ccagtgtacaagcacgaccgtgtcctcttccgagggcatgagtacactctcagtgacctg
gaggatgtgaagctccctaaccctcacctgggtcctccaggggagagactggcgctgtac
attctccgcaagcagggactggttccggagcacgtagagaccaggcctctctacagcccc
ctgcagcccgaaattgagcaggggaggctccagctctgggtcgacatgttcccaaagtct
cttggccctccagggcccccatttaacatcacaccacgcaaggcaaagaggttttatctg
cgctgtgtgatctggaacaccagcgatgttatactggatgatgtcagtgttactggagag
aagatgagtgacatttatgtgaaaggttggatgctgggctatgaagaaaacaagcagaag
actgacgtgcactaccgctctctgggtggagaggggaacttcaactggagattcatcttc
cccttcaactacctgcctgccgagcaggtgtgcaccttcaacaaaaaggaacacttctgg
agcttggataaggaagaaaccaagactagccccaagctgatgattcagatatgggacaat
gacaaattctcctttgatgactatttgggttctgtggagttggacctgaacaagatggtg
cgtccctcgaagagcccggagaagtgcaccctggacatgctggagcagtccctctgccca
gagaaactcgtctctctctttgagcaaaagaccatgaggggctggtggccctgtgtaggg
gagagcaatggggagaagataattgcagggaaggtggagataactctggagatcgtgtct
gagcaggagcgggatgagaagcctgctggactgggcagagaggagcccaacatgaatccc
aaactggaggaccccaaacgccctgagacatccttcctgtggttctcctctccatttaaa
acaatgaaatacatcctgtggaggaggttcaagtggatcatcattgctgtcatcatcatt
gtcattctgctgctcttcctcggagtcttcctctactccttcccgaactatgctgctatg
aagttggtgggaccctttgcaaaacgagaggccgttgagaccctcaggcctattgagaga
cgtgggggtgaggagccactaacatcccttggaggttaa
DBGET
integrated database retrieval system
