Polyodon spathula (Mississippi paddlefish): 121294443
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Entry
121294443 CDS
T07273
Name
(RefSeq) two pore calcium channel protein 2-like
KO
K14077
two pore calcium channel protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121294443
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121294443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121294443
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
121294443
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Motif
Pfam:
Ion_trans
PKD_channel
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
121294443
NCBI-ProteinID:
XP_041074063
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All DBs
Position
19:2885171..2901318
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AA seq
629 aa
AA seq
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MVCFLIFMADVSVKSYLIGWEEFRKNKWLIAYIFVIAFSMLDWMVSLCLHCEEAVRVRRL
LRPFFLLQNSSLMKKTLKCIKRTIPEITSVMFLLALHLFLFTTFGMLLFSQGKDANGNAE
WQAYFRNLPDSLSSLLVLLTTANNPDVMIPTYSKNRFYCIFFILFSGFGTFFLMNLLTAV
IYNQFKGYLLISIQTSLLRRCLGIRAAFEVMCFQCQSMSGINERVENVNTELVLKILHGV
HIKPYYKEAIIQKTQQYADGSISANQFQKLFDELDKDTIKQHPPKPEYQLVFLQKLQFIF
SHRYFSLAGNVVALANVVYICVVLIIDEDKAISERYDYFLGAVNCFFIVYYLLEMKLKMF
ALGFKGYMSHRSNIFDGFVIVFLLCLQITIFAMYSFQHPLWDPDMKALMSLWEMVRLVNM
LIVFRFLRIIPNIKLMALVASTLLDLVKNFRAFAGILVVVYYAFAVLGVMLFEGVITAPG
NMSVVVNTSVTNATVNYSATCGTYEQLEYWPNNFDDFAATLVLLYNIMVVNNWQVFMDAF
ARYSTPWSKLYFVAWWLTSSVMWVNLFVALILENFIHKWDRSHHGTLSDEDQAECQVTVQ
SIFREFLQEPTEEELLSKLEQHPHWNIKR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtttcctgatcttcatggctgacgtgtctgttaaaagctatttaattggctgg
gaggaatttcggaagaacaaatggctcatagcctatatctttgtgattgcattttcaatg
ttggactggatggtgtcactctgtctgcactgtgaagaggccgtgagagtccgaagactc
ctgcggcctttctttctccttcaaaactcgtcactaatgaagaagactttaaaatgcatt
aaaagaaccattcctgaaataacaagtgttatgtttctgttggcacttcatctgtttctt
tttacaacgtttggcatgctgttgttttcccagggaaaggatgctaatgggaacgcagaa
tggcaggcttacttcagaaacctacccgattcacttagttcgttactagtgctcctgaca
acagcaaataatccagatgtgatgatccctacatactcaaagaacagattctattgcatc
ttcttcattctcttctctggttttggaaccttctttttaatgaatttactgactgctgtt
atctacaatcagttcaagggatatttgctgatctctattcagacatccctgctaagaagg
tgcctggggatcagggcagcatttgaagtgatgtgttttcagtgccagtccatgtcgggc
ataaatgagcgtgtggagaatgtcaacactgagctggtcctgaagattctacatggggtg
catataaaaccttattacaaagaagccataatccagaaaactcagcaatacgctgatggt
tcaatatcagccaaccaatttcagaaactttttgatgaacttgacaaggacacaatcaaa
cagcaccctccaaagccagagtaccagcttgtgttcctgcagaaactacagttcatcttc
agccatcgttacttcagcctagcagggaatgttgtcgcgttggcgaatgtcgtctatatt
tgtgtggttctgattattgacgaagataaggccatttcagaacgctatgattactttctc
ggggcagttaactgcttcttcattgtgtactacctgctcgaaatgaagctgaagatgttt
gctttggggttcaaaggctacatgtctcacaggagtaatatatttgatggatttgtgatt
gtctttttactgtgtctgcagatcaccatttttgctatgtacagtttccaacatcctctg
tgggacccggatatgaaggcattgatgtctctgtgggagatggtccgtttggtgaacatg
ctgattgtgttcagattcctgcggattatcccaaacatcaagctgatggctctggtggcc
agcaccctgcttgacctggtaaagaatttcagagcctttgctggaatcctggtggttgtg
tactatgcttttgcagtgctcggtgtaatgttgtttgaaggtgttatcacagctcctggg
aatatgagtgtggttgtcaacaccagtgtcacaaatgctacagtaaactacagtgcaaca
tgtggcacttatgagcagctggagtactggccaaacaactttgatgactttgcggcaact
ctggttcttttgtacaatatcatggtggtgaacaactggcaggtgttcatggatgctttt
gccagatactcgaccccgtggtcgaagctgtactttgtggcctggtggttaacctcctcg
gttatgtgggtcaacctgtttgttgctttaattctggagaacttcatccacaagtgggat
agaagccatcatggtaccctctctgatgaagatcaagctgagtgtcaggtgacagtgcag
tcaatattcagagagtttttacaggaaccaacagaagaggaacttctttcaaaactggag
cagcaccctcactggaacatcaagcgctga
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