Polyodon spathula (Mississippi paddlefish): 121294456
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Entry
121294456 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121294456
04137 Mitophagy - animal
121294456
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121294456
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121294456
04121 Ubiquitin system [BR:
pspa04121
]
121294456
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121294456
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121294456
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Others
121294456
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121294456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
121294456
NCBI-ProteinID:
XP_041074082
LinkDB
All DBs
Position
19:26376430..26389985
Genome browser
AA seq
1086 aa
AA seq
DB search
MPGVSSGVKELYLSSCLGELNKKAEIRADKINTRSYVQSACKIFKTAEECRLDRDEEKAY
VLYMKYLSVYELIKKRPDFKQQQEYYLSLLGPTSFKKSIEEAEKLSDSLKLRYEEAEVRK
RLEERERQEEKKKQEKSRNEDKDSGKSALKDLEDFKKENKKIKGDPINAKKIKSDTPKVT
VPPGGITAEKLFKMLQDPSINVIVMDARSQNDYQESRMQVSTQNCISIPEEAVSPGITVN
QIEAKLPEESKGQWKRRGFVDYIIMFDWFSSVKDLKLGTTLQSLKDALFKWDSQTILRSE
PFVLEGGYESWLMCYPMYTTNAKVTLPRQERTETIPKSLNFSYPSLEEPPAPVTPEPEPE
PQPAPEPEPSLELNGMKGSVEAELPMKDVEELDETSRIITKLTPWSPSASADKPVNVSAR
QPTVTVVPQFDRTKKPSVKIPDSSRPNHEATAKDQQPVSNGPVIPDRSVKPSFDKKNQEE
QWREQRRQELERRVKEEEEEEEEEERKWREKLQEEKEKEERERKLKEEAERLDAEQDKEH
TGDAQKSSRESIPDITTNDENKVPLKRSNDIENGSRETRFIKDNTEDNIEKPKPQQEPLT
RARNEEMGRSVPGLPHGWMKFLDTVTGTYRYYHSPTNMVHMYLPEMSISVTPPATPPTAK
LKQSPQAELDREQSKLKRSYSSPDITQAIQEEGKKKVPVIPTINRETKPSSLTDYTKTEI
VVRPSAAKIRNLNPVFGGLGPALTGLRNLGNTCYMNSILQCLCNTPRMAEYFHRNYYQDD
INRSNFLGHKGELADEFGVVMKALWSGQYKFISARDFKITIGKINDQFAGYEQQDSQELL
LFLMDGLHEDLNKADNRKRYKEETTDHQDDNKAADLAWEKHKRLNKSIIVALFQGQFKST
VQCLTCHRKSRTFEAFMYLSLPLASSNKCTLQDCLKLFSKEEKLTDNNRFFCSHCKTHRD
STKKIEIWKLPPILLVHLKRFSYEGRWKQKLQTSVDFPLENLGMSQYVIGPKNNVKNYHL
YGVSNHYGGLDGGHYTAYCKNAIKQRWYKFDDSDVSELSASSVKSSAAYIFFYSSLDHRV
PELAAY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgccaggggtatcctctggtgtgaaggagctgtacctctcctcctgtttgggtgagcta
aacaagaaggctgagattagagcagacaaaatcaatacaagaagctacgttcagagcgcg
tgtaaaatctttaagacagcagaggagtgtcgtttagacagagatgaagaaaaggcatat
gtcctctatatgaagtatctgtctgtctatgagcttattaaaaaacgtccagacttcaag
cagcagcaggaatattacctctctctccttggaccaacaagctttaaaaagtctatcgaa
gaagcagaaaagctgtcagatagtcttaagcttaggtatgaggaagccgaagtgcgcaaa
aggcttgaagaaagagaaaggcaagaagaaaagaaaaagcaggaaaaatccagaaatgag
gataaggactctggaaagagtgccttgaaggacttggaagatttcaagaaagaaaataag
aagataaaaggggatccaataaatgcaaagaagataaaaagtgatacacctaaagttact
gtgcccccaggaggaatcacagctgaaaaactcttcaaaatgctgcaggatccaagcatc
aatgtcattgtcatggatgcaaggagtcaaaatgattaccaagagtcacgaatgcaagtg
tctacccagaactgcatcagcattcctgaagaggctgtcagtcctggaataactgtaaac
cagattgaggccaagttgccagaggaatccaaagggcagtggaagcggcgggggtttgtg
gattacatcattatgttcgactggttcagctctgtgaaagatctgaagctagggacaact
ctgcagagcctaaaagacgccctgtttaagtgggacagtcagactatcttacggagtgag
cccttcgtcttagaaggaggttatgaaagctggcttatgtgttatcccatgtatacaacc
aatgctaaagtcacgctgcccaggcaagaaaggacagaaacaatccctaagtctttgaac
ttcagctatccatccttagaggaacctcctgcccctgtcaccccagaaccggagccggaa
ccgcagccagcgcccgagccagagccctctctggagctgaatggaatgaaagggtctgtc
gaagcagagcttccgatgaaagacgtggaagagctggatgagacctcaagaataatcacc
aagctgactccatggtctccctctgcttctgctgataaacctgtgaatgtgtccgccagg
cagccaacagtgacagttgttcctcagtttgaccgcacaaaaaagccatcggttaaaata
ccagacagttccagaccaaaccatgaagccacagccaaggaccaacagccagtttcaaat
ggaccagtcattccagaccgttcagtaaagccatcgttcgacaagaagaaccaggaggag
cagtggagggagcaaaggaggcaggagctggagcggagggtgaaggaagaggaggaggag
gaggaggaggaggagaggaagtggagagagaagctgcaggaggagaaagagaaggaagaa
agagagcgcaaactcaaagaggaggcggaaaggcttgatgcagagcaggacaaggagcac
actggagatgctcagaagagctctcgagaatccattcctgatattacaaccaatgatgag
aacaaagttcctttgaaacgtagtaatgacatagagaatgggagccgagagacaagattt
ataaaagataatactgaagacaacattgaaaaaccgaagccccagcaagagccattgaca
cgggcaagaaatgaggagatggggcgaagtgtcccgggactgccacatgggtggatgaag
tttttggacacagtgactggtacttaccgttactatcattcacctacaaacatggtccac
atgtacctgcctgagatgagtatatctgtgactccacctgctactccccccaccgccaag
ctaaagcagtccccccaggcagagctggaccgggagcagtctaagctgaaacgctcctac
tcatcccctgacatcacccaggccattcaggaggagggcaagaagaaagtccctgtgata
cccaccatcaaccgggaaaccaagccctctagtctcactgactacactaaaactgaaatt
gttgtgcgaccctcagcagccaaaatccgtaacctgaaccctgtgttcggaggcctgggg
ccagctctcaccgggcttcgaaatctcggcaatacctgctacatgaactccatcctgcag
tgtctgtgcaacacgccccgcatggctgagtacttccacaggaactattatcaagacgat
attaacagatcaaattttctggggcataaaggtgagctagcagatgaatttggggtagta
atgaaggcactgtggtcagggcagtacaaattcataagtgctcgagatttcaaaatcacc
attgggaagatcaatgaccagtttgctggctatgaacagcaggattcccaggagctgttg
cttttcctgatggatgggctccatgaagatctgaataaagctgacaataggaagaggtac
aaagaagaaaccactgaccaccaggacgataataaagcagcagaccttgcttgggaaaaa
cataagaggctcaacaagtccatcattgtcgctctgttccaaggccagttcaaatccaca
gtgcagtgtctgacttgccacagaaaatcaaggaccttcgaagctttcatgtatttgtca
ttacctctagcatcctcaaacaagtgtacactacaggactgcctgaagttattctccaaa
gaggagaagctgacagacaataacagattcttttgcagtcactgcaaaactcacagagat
tcaacaaagaaaatagaaatctggaaactcccacctattctgttggtgcatttaaaacga
ttttcatatgaaggacggtggaaacagaagctccagacttctgtagactttcccttggaa
aacttgggcatgtcccaatacgtcattggcccaaagaataacgtgaaaaattatcacctc
tatggagtatctaaccattatggaggcttggatggagggcactacactgcctactgcaag
aatgccataaagcaacggtggtacaagtttgatgacagtgacgtgtcagaactttctgca
tcttcagtaaagtcctcggctgcttatatcttcttctactcctcactagaccacagagtg
cctgaattggctgcatattaa
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