Polyodon spathula (Mississippi paddlefish): 121294510
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Entry
121294510 CDS
T07273
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121294510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121294510
04131 Membrane trafficking [BR:
pspa04131
]
121294510
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121294510
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121294510
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121294510
mRNA cycle factors
P-body specific factors
121294510
Membrane trafficking [BR:
pspa04131
]
Others
Actin-binding proteins
Myosins
121294510
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121294510
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121294510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
HTH_17
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121294510
NCBI-ProteinID:
XP_041074217
LinkDB
All DBs
Position
19:complement(27459957..27521761)
Genome browser
AA seq
1897 aa
AA seq
DB search
MAASELYTKHARVWIPDAEEVWKSAELLKDYKQGDALLQLRLDDGTDVEHKLDPKTKNLP
HLRNPDILVGENDLTALSYLHEPAILHNLKVRFMDSKLIYTYCGIVLVAINPYETLPIYG
ADIINAYSGQNMGDMDPHIFAVAEESYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASETNVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKKYQIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCASAQLPELKVLKLGQATNFHYTKQGRSPVIDGVD
DAKEMVNTRHACTLLGISEPYQMGIFRILAAILHLGNVEIKDRDSDSSIVPPNNAHLTVF
CDLMGVTYQDMSQWLCHKKLKTAAETYIKPIPKLQAVNARDALAKHIYAKLFDWIVDHVN
KALRSTVNQNSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECRMPKGSDDTWAQKLYNTHLNKCALFHK
PRLSNKAFIIQHFADKVEYQCDGFLEKNKDTVNEEQITVLKTSKKFELLVELFQDEEKAT
TPTGPPPGGRTRLSVKQTKTRPGQTSRDHKKTVGLQFRNSLQLLMDTLNATTPHYVRCIK
PNDNKHPFTFDPSRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD
RRLTCRNVLEKLIKDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRVACIRIQKTIRSWLL
RKKYLRMRSAAITIQRYVRGYQARCLAKFLRRTQAAVTIQKFQRMYRERKRYRRMQAASL
VVQCMLRAYMARQKYQAMLREHKTIIIQKRVRGWLARLHYKRSLEAVVYLQCCIRRMRAR
RELKKLKIEARSVEHFKKLNIGMENKIMQLQRKVDEQHKEKKAMTERLNSLANSYAVESE
KLRNEVERLRLTEEEARNNSNRITTLLEELARLKKELCDTQRDKRTIEEWADKYKLETEQ
LVAELKEQNMLLKTEKDDLNRLIQEQNQEMTEKMEKALVEETKQLECELNEERSRYQNLL
TEHRRLEDRHDDLKEEMKLMVNIPKPGHRRTDSTHSSNESEYTYNSEFAESEESARGAED
VTKAPLDMSLFLKLQKRVTELEQEKQSLQNELDKKEEQAYRARAREEDEQNRVRGAELEY
ESLKRQELDTENKKLKNDLNELRKALSEKSPPGVTAPGSPAYKVVMEQLNSSNEELEVRK
EEVLILRSQLVSQKEAIHQKENKQTMTEAMPCMEDVHKMRDAGEITQAYLAVKESNRSPK
FTSKPVAVSDLMSRIRSPPQDYHVLNEDGELWLVYEGLKETNRLLESQLQTLRKSHENET
EVLREELQSVKEDNNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPT
KYQFYRISLYKRIIDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEISGQMENVSPGQIID
EPIHPVNIPRKEKDFQGMLEYKKEDESKLVKNLILELKPRGVAVNLIPGLPAYILFMCLR
HADYINDDQKVRTLLTSTINGIKKILKKRGDDYETVSFWLSNTCRFLHCLKQYSGEESFM
KHNTPRQNEHCLSNFDLAEYRQVLSDLAIQIYQQLVKVMENILQPMIVSGMLEHETIQGV
SGVKPTGLRKRTSSIADEGTYTLDSILRQLNSFHSTMCQHGTDPELIKQVIKQMFYIIGA
VTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMTSGAKETLEPLIQAAQLLQVKK
KTDEDAEAICSMCNALSTAQIVKVLNLYTPVNEFEERVSVSFIRTIQIRLRDRKESPQLL
MDTKNIYPVTFPFNPSSLALETIQIPSSLNLLFLTRV
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtctgagctctatacaaagcatgcccgggtatggatccctgatgcagaagaa
gtctggaagtcggctgaacttctcaaagactacaagcaaggagatgcattgcttcagctc
agactggatgatggcacggacgtggaacacaaattggaccccaaaaccaaaaacttgccc
catctacgtaaccctgacatccttgttggtgaaaatgacctcactgccctcagttacctc
catgagcctgcgatcctgcataacctcaaagtgcgcttcatggattcaaagcttatctac
acctactgtggtatcgtcttggtggccatcaatccctatgagacgctccccatctatgga
gcggacatcatcaatgcatacagtggacagaacatgggggatatggatccgcatatattt
gcagtggccgaggagtcatataaacaaatggccagggatgagaggaaccagtctatcatt
gtgagtggagaatctggtgcagggaagacagtgtccgccaagtacgccatgagatacttt
gcaacagtcagtggttcagccagcgagaccaatgtggaggagaaagtgctggcatccaac
cccatcatggagtctataggaaatgccaaaacgaccagaaatgacaatagcagtcgtttt
ggtaagtatattgagattggattcgacaagaagtatcaaatcattggagccaacatgaga
acctacctgctggagaaatcaagagtggtgtttcaggcagatgatgaaaggaattaccat
attttctaccagctttgtgcctctgcacaattgccagagcttaaagttcttaaactcggc
caggcaaccaacttccactacacaaaacaagggaggagccctgtgattgatggggttgat
gatgcaaaggagatggtcaacactagacacgcctgcactttactaggtatcagtgaaccc
taccagatgggaattttccggattcttgctgctatcctgcaccttggaaacgtggagatt
aaagaccgggattctgacagcagcatagtacctcctaacaatgcccacctcactgtcttc
tgtgacttgatgggagtgacatatcaggacatgtcccagtggctgtgccacaagaagctc
aagacagccgcagagacctacatcaaacccatccccaaactgcaggccgtcaacgccagg
gacgcccttgccaagcatatctatgccaagctctttgactggatagtggaccatgtcaac
aaggccctgcgctccactgtcaaccagaactctttcattggagtgcttgatatttatgga
tttgagacgtttgagatcaacagcttcgaacagttctgtataaattatgcaaacgagaaa
ctgcagcaacagtttaacatgcatgtcttcaaactggaacaagaggagtacatgaaggaa
cagatcccatggaccttgatagacttctatgacaatcagccttgtatcaatctgatagag
gccaaaatgggaattctggatttgctggatgaggagtgcaggatgccaaaaggatctgat
gatacatgggcccagaaattatataacactcacttgaacaagtgtgctctgttccataaa
cctcgcctctcaaataaggcttttattatccagcactttgccgacaaggttgaataccaa
tgtgatgggtttttagagaagaataaagacacggtcaatgaagagcagattactgtgctg
aaaacaagcaagaagtttgagttactagtggagctgtttcaggatgaggagaaggcgacc
accccaacagggcccccgccaggcggtcgcactcgactcagcgtcaaacagaccaaaaca
cgccccggacaaaccagccgggaccacaagaaaaccgtggggcttcagtttcgtaactct
cttcagctgctaatggatacgctcaatgctaccaccccccactatgtgcgctgcatcaaa
ccgaatgataacaaacaccccttcacgtttgatcccagtagagctgtgcagcagctcaga
gcttgtggtgtcctggaaacaatccgtatctctgcagcaggcttcccatccaggtggacg
tatcaggagttttttagccgctaccgtgttctcatgaagcaaaaggatgtgttgagcgac
aggaggctaacatgtaggaatgtcttagagaaactgatcaaggatcaagacaagtatcag
tttggcaaaacaaaaattttcttccgggccgggcaagtggcctacctggagaaactacgg
gctgacaaactgcgcgtcgcctgcatccgtatccagaagaccattcgcagctggctgctg
cgcaaaaagtacctgcgcatgcggagcgcagccatcaccatccagagatacgtccgcggc
taccaggcacgatgccttgccaagttcctgcgccggacccaggctgccgtcaccatccag
aagtttcagcgcatgtacagggagcgcaagaggtaccggcgcatgcaggctgcgtctctc
gtcgtccagtgcatgctgcgagcgtacatggctcggcagaagtaccaggcgatgctacgg
gagcacaaaactatcattatccagaagagggtacgaggctggctggcccggctgcattac
aagaggtccctggaagctgttgtttacctccagtgctgcatccggcgcatgagggccaga
cgggagctgaagaagctgaagatcgaggcccgctcggtggagcacttcaagaagctcaac
atcggcatggagaacaagatcatgcagctgcagcgcaaggtggatgagcagcataaagaa
aagaaagccatgactgagcgtctgaatagtctggcgaactcgtacgctgtagagagcgag
aagcttcgcaacgaagtagagcggctgcgactgaccgaggaggaggccaggaacaactcg
aaccgcattaccaccctgctggaggagctggccaggctgaagaaggagctgtgcgacacg
cagagggacaagaggaccatcgaggagtgggccgacaagtacaaactggaaacggagcag
ctggtggctgagctcaaggagcagaatatgcttctgaagacagagaaagatgacctgaac
cgcctcattcaagagcagaaccaggagatgacggagaaaatggagaaggcgctggtagag
gaaaccaagcagctggagtgtgagctgaatgaagagcgctcccgatatcagaacctcctg
accgagcaccggcgcctggaggatcgccatgacgacctcaaggaggagatgaagctcatg
gtgaacattcctaagccaggccacaggaggacagactccacccacagcagcaatgagtct
gagtacacgtacaactccgaattcgctgagtccgaggagagcgcacggggagctgaggat
gttaccaaggctcctctggacatgtccctgttcctgaagctgcagaagagggtgacggag
ctggagcaggagaagcagtccttgcagaacgagttggacaagaaagaggagcaggcttac
agagccagggccagggaggaggatgagcagaacagggtgagaggggcagagctggaatac
gagtctctcaagcgtcaggaactggacactgagaataagaagctgaagaatgatttgaac
gagctgcgcaaagctctgtctgagaagtctcccccgggggtcacagcgccgggctcccct
gcctacaaggtcgtcatggagcagcttaactcctccaatgaggagctggaggtccgcaag
gaggaggtgctcatcctccgctcccagctggtcagccagaaggaagccattcatcagaag
gagaacaagcaaaccatgactgaagccatgccctgcatggaggacgtgcacaagatgagg
gatgctggagaaataactcaagcatatctagccgtgaaagaaagcaacagatcgccaaag
ttcacctctaagcctgttgcagtcagtgatctcatgagtagaataagatcaccccctcaa
gactaccatgtgctgaatgaggacggagagctttggctggtttatgaagggttaaaggaa
accaacaggctgctggagtcccagctccagactctgaggaagagccacgagaacgagacg
gaggtgctgcgtgaggagctgcagagcgtcaaggaggacaacaaccggcagcagcagctc
ctggctcagaacctccagctgccccccgaggctcgcatcgaggccagcctgcagcacgag
atcaccaggcttaccaacgagaacctgtactttgaggaattatatgcagatgaccccacg
aagtatcagttctaccggatttcgctttacaaacggatcattgatctcatggaacagttg
gaaaaacaggacaagactgttcgcaaactaaagaagcagctgaaagtatttgcaaagaag
attggggagctagaaataagcggtcagatggagaatgtgtctccaggccagatcatcgac
gagcccatccaccccgtcaacattcccagaaaggagaaggatttccagggaatgctagag
tacaagaaggaggatgaatccaaactggtgaaaaacctcatcctagagctaaaacctcgg
ggtgtggctgtaaacctgattcctggcttaccggcctacatcctcttcatgtgtctcagg
catgcagattatataaatgatgaccagaaagtgcgcactttgttaacctcgactattaat
ggcatcaagaagatcttaaagaaaagaggcgatgactatgaaactgtctcgttctggctg
tctaacacctgtcggttcctgcactgtttgaagcaatacagcggagaagagtcctttatg
aagcacaacaccccccgacagaatgaacactgcctctctaacttcgacctggcagagtac
aggcaggtcctgagcgacttggccatccagatttaccagcaactcgtgaaggtcatggag
aatatccttcagccaatgatagtttcgggaatgttggaacatgagacaatccagggtgtg
tcgggagtaaagcccactggcttgcgtaagaggacctccagtattgcggatgaaggcacc
tacacgctggactccatcctgcgtcagcttaactccttccactccaccatgtgccagcac
ggcacagacccggagctcatcaaacaggtcatcaagcagatgttctacatcatcggggcc
gtcaccctcaacaacctgctgctacgcaaggacatgtgctcctggagcaaaggaatgcag
attagatacaatgtgagccagcttgaggaatggctaagggacaagaatctaatgacaagt
ggtgctaaggagacactggagcctttgatccaggcagctcagctgttgcaggtgaagaag
aagaccgatgaggatgcggaggcaatctgctcaatgtgcaatgctctttcaacagcacag
attgtaaaagtgctgaatctgtacactccagtaaatgagtttgaagaaagggtttctgta
tcgtttatacgtaccatacagatacgtttacgagaccggaaggaatctccccagttacta
atggacaccaaaaacatctacccagttacatttccattcaacccctcttcccttgcactg
gaaaccattcagatccccagcagcctcaacctgttattcctcactcgtgtctaa
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integrated database retrieval system
