Polyodon spathula (Mississippi paddlefish): 121294576
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Entry
121294576 CDS
T07273
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121294576 (ppfibp2b)
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121294576 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
FxsA
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
121294576
NCBI-ProteinID:
XP_041074330
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All DBs
Position
19:5358021..5418512
Genome browser
AA seq
1026 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAATESTNGLFDIEAPVHLRSLQVLQLTEELRIALEL
LTNEGEKGYLRTQISGVTAQYLTDWLETGTANPRSSVSSETYQERLARLEADKESLVLQV
SVLTDQVEAQGEKIRDLESSLDEHHHKRQTTQEMLQQELLSRTRLETQKLDLIDEVSHLK
LKLVGMEKEQNDCDEKQHKAESVVNLISELQEEMCRFQQEISTRIQEKKEQESNPSDTKA
KDLPQSRTGTSLASPSRDEESCRCRGENGLAQELKLLKNKVDELEGEKSQYERKLKETKA
EIADLQKLLATKDAEIERLQTQLSCRTPVSSDSADREEVFRRRLKEKYQELQRLKIGMES
LLAANEEKDRRIEELTILLNQYRKMKDAMAVAQGSCERILSVSSEEELNGSMDTRNPVHK
TNIENIRSEKSSRCSSFSLVSPSSIQNELETSFRSIHTSPEPLLTPNEDSFEDRQWAQQR
MLSSSLEELQSGSLQKHVVAEPVEPVVLPESRPYVEDNKYQTLPGKFSRANHNGDNEKYK
PSGVQRDKDEDEDSEFNLNRSRSASAPALGKTLKADDATLSSSDLSPQSSGVDSAQQSPV
SPQNRKNPKGIKKFWGKIRRTQSGSLQSSDLGMSQFQRGGLRATAGPRLARTKETGNTTS
DRNAPFSQWRTEQVCSWLEDFGLSQYVNLARQWVKTGHTLLTASPQDLEKEMGIKHPLHR
KKLQLALKAFSMKQAEKSADLDHIWVTRWLDDIGLPQYKDQFNEGRVDGRMLQYLTVNDL
LFLKVTSQLHHISIKCAIHVLHVNKFNPNCLRRRPGDEQNSSPSEVVQWSNHRVMEWLRS
VDLAEYAPNLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLTTNFNTLIGSEA
QQEKREFIESSSYAPLTTTAKVRPKKLGFSNFGHLRKKKFDESTDYVYPMDTVQSATNGA
QKGYGGHRRLSPVFDRDLHRLEQMEVTEGTVMQIGALSEGINNLTYMLSHDEFLKDFRWE
QEELQC
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagatgctagtcatatgcttgaggcagccttggagcaaatggatgatataatt
gcaggctccaaagctgccacagagtccaccaatggcctctttgacattgaggcaccagtg
catttgaggtccctgcaagttttacaacttacggaagagctgagaattgcattggaatta
ctgacgaacgaaggggagaaagggtatttaagaacacagatctcaggcgtcacagcacag
tatctgacggactggctagagactggcacagcaaatcctcgctcttctgtaagcagtgaa
acgtatcaagaacgtctggcacgtttagaagcagataaggagtcactggtgctacaggta
agtgtgctcacagaccaggtggaagcgcagggggagaagatccgggacctggagagctct
ctggacgaacaccatcacaaacggcaaaccacacaggaaatgctacaacaggagctgctg
agcagaactcgcctcgaaacccagaaactggatctgattgatgaagtctcacacctaaaa
ctgaaactagttggaatggaaaaggagcaaaatgattgcgacgagaaacagcacaaagct
gagtctgtggtaaatctgattagtgaactgcaagaagagatgtgtagatttcagcaagag
atcagtaccagaatccaggagaaaaaggagcaggagagcaatccgtctgacactaaagct
aaggacctcccgcaaagcagaacaggcacaagtttagccagccccagcagagatgaggag
agctgtcgttgtaggggagagaatggattagcacaagaactgaagctcctaaaaaacaaa
gtggatgaactggagggggaaaaatctcagtacgaaagaaaactcaaagaaactaaggcg
gaaatagctgatcttcagaagctgctggcaacaaaagatgcagaaattgaacgtctacag
acccagctatcatgtagaactcctgtatcgagtgacagtgcagacagagaggaggtgttt
aggagaaggctgaaagaaaagtatcaagaattgcaaaggttgaaaataggaatggaatcc
ttgttggcagcaaatgaagaaaaggaccgtcgaatagaggagctgacgattctattaaac
cagtacagaaagatgaaagacgctatggccgtggcacaaggctcctgtgaaagaatattg
tcagtaagcagtgaggaagaactcaatggcagtatggacaccagaaaccctgtgcacaaa
accaacatagaaaacattagatcagagaagtcctccaggtgttcatcgttctccttagtt
tccccttcatctatacaaaatgaattagaaacaagctttagaagtatacacacttctcct
gaacccttacttactccaaacgaagacagctttgaagatcgacaatgggcacagcaaagg
atgttatccagtagtttggaagaattacaaagtggatcattacaaaagcatgtagttgca
gaaccagtagaacctgttgtgttgccagagagccgaccatatgtagaagataacaagtat
cagacattgcctggaaaattctctcgggcaaatcataatggagacaatgaaaaatacaag
ccctcaggtgtccaaagagataaggatgaggatgaagacagtgaattcaacctaaaccgc
agcaggagtgccagtgctccagctttaggaaagacactaaaagccgatgacgcaacccta
agttcatctgacctttcacctcagtcctctggagtagactcagcccagcagtctccagtg
tcgccacaaaacagaaagaatcccaaaggaatcaagaaattttggggaaaaatacgaaga
acccagtcaggtagccttcagtcaagtgacctgggcatgtcgcaattccaaagagggggg
ctgcgggccacagcggggcctcgtctggcaaggactaaagaaacaggaaacacaacaagt
gaccggaatgctccattttctcagtggaggacagagcaggtttgcagctggctggaggat
tttggtctgagccagtatgtgaacctggcaaggcagtgggttaaaactggacacacactc
ttaacagcatcccctcaagacctggaaaaggaaatgggaattaaacatccactgcacaga
aagaagttacagttggcactcaaagcattcagtatgaaacaggcagagaaatctgcagac
ctggaccatatctgggtgacacgttggctagatgacatagggttacctcaatacaaagat
cagttcaatgaaggacgagttgatggaaggatgctacagtacctaacagtgaatgatctc
ctgtttcttaaggtcaccagccagctccatcacatcagtattaaatgtgccatccatgta
ctgcatgtcaacaagttcaacccaaactgcctgagacgcaggccaggagacgagcagaac
agctcgccctctgaagtagtgcagtggtcgaaccatcgggtgatggagtggcttcgctca
gtggacctggcggagtatgccccaaacctgagaggtagtggagttcatggcgggctaatt
attctggaacctcgttttaattctgacaccttggcaatgctcctcaacattcctccccaa
aagacgcttctaaggaggcacctaaccacaaacttcaacacgctgattggttcagaggcc
cagcaagaaaagagggagttcatagagtcatctagctacgcacccctgaccaccacagca
aaagtcaggccaaagaagctgggattttcaaacttcgggcatctaagaaagaagaagttt
gacgagtccacagattatgtttacccgatggacacagttcagtctgcaacgaatggagcc
caaaagggctatgggggacacaggagacttagtcctgtctttgacagggacttgcataga
ctggagcagatggaggttactgaaggaacagtaatgcaaataggggccctatcagaaggc
attaacaaccttacatacatgctaagccatgatgagtttctgaaggacttcagatgggaa
caagaagaactgcagtgttaa
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integrated database retrieval system
