Polyodon spathula (Mississippi paddlefish): 121294621
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Entry
121294621 CDS
T07273
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121294621
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Other basic domains
RF-X
121294621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
121294621
NCBI-ProteinID:
XP_041074452
LinkDB
All DBs
Position
19:complement(28150502..28188287)
Genome browser
AA seq
1461 aa
AA seq
DB search
MMAEDQQHQKPSPGTGTLPALVPGLQGVEASALQHKIKNSICKSVQSKVESILQGVEKFT
DIEKLYLYLKLPSGPNSGNDKSDQSSMSSSRTQQMHAFNWIRNHLEEHPETSLPKQEVYD
EYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSLP
NLDFHKTGDGPEGMESSGQLQSAEEEVRSAACDLVCEWAQKVLSRQFDAVEDLARFLLNS
HYIGTKSMAALTVMTGAPTGMKTPTQTSAFVPTAETNSFQPQVKTLPSPSVDAKQQLQRK
IQKKQQEQKLHSPLPGEAHGRRVDGGTPGPVPCIHRGSPALLSPQPTIGIVVAAVSSPVT
VQRNRQLVTSPSPVGTPEGKVLPVNFQVVAQHMHSVKQSPKTPQNIPASPIDRSARHRYP
QILPKPCATSALTLRSPTTVLITNSPIKTVVPTPHVSSVNVVKMTAISLTPSNSGTALRP
ASAGNSGTGAAEEPRAGLQIRHGSVVSLQSPVARSKSVTTTPTIEIKMEPGAITDESQAL
STERLAGTQEASGGQGGGCVKLRAISDPTTQAKGSPGGGGEARPEGTRTKGDAKSLLDNT
VVTSTVGNNNPSTFFIAISNPNTSMTLSSNGNAASSPKESLAGSKSPRKRSTGLASESQA
PPIKKVFTSQQSTISLESQKVGLSAAVKKVTKATLPAKPDCTPAPTPGKVTVKLNSTVPT
RILAQTPSDTQAVYSSSFLTVVKPQSSQDIKVKRDETPSSMDTGAGPGIGSDQTLLQHIA
GNPPVAPVNTGMLENPGVNDLQKSMWESVQLGVPQQDYTAQLQSHKPLQVPVVDQQQALI
QGQPSNQLSLHPDMVDFVASQPNDNYFAFDDDITQDSIVEELVLMEEQMNLNNNSYTNCL
GMSLQSQSTVPQGAIMSSHLTGNPFYHSAHSSSTPVHTPTPTPTPTPTPTPTPTSEMMGG
GQGLSRESPCSQMAQTTPVDSALGSSRHTPIGTPHSNCSSSVPPSPVECRNPFAFTPINS
SIAYHDASIVSSSPVKPMQRPMATHPDKAKLEWMNNGYNSVVGNAAISNNGIGILPSYQD
LLDDQFRKPHAFAIPGQSYPTQTRHHDAHFGRLTPISPVQPQVASVSNLCKQEGFAVPAP
LDNKGANSSTSSNFRCRSVSPAVHRQRNLSGSTAYPVSNLPRSSVNPFSSPVTPEVLNIL
TNSHSDGSANNMAQRSQSVPLNVMMLTAVPPMQKQSNNKKITNVLLSKMDSDSDDAVRGL
GINNMPSNYTARMNLTQILETTPSFPSANHQIQVNSSPSVYEFQKPSYLVKNSRTDQISF
SSGETQAQSDIGEQQQQQLQQQQNQQQLDFNSTVKDLLGDDGLNPSSQLVGQVASELNAV
VSDFPSDIRLNSELSSSINDLNTLDTNLLFDPNQQQGQYEDSTLEELKNDPLFQQICSES
VNSTGFDWLESKDQPTVEMLG
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgaggatcaacaacatcagaagccgagcccggggacagggactttgccagcc
ctcgttccggggcttcaaggggtcgaggccagtgctctgcagcacaaaataaaaaactcg
atctgcaaatcagtacaatcaaaagtggagagcatattgcaaggtgttgagaagtttaca
gacattgaaaaactctacctctaccttaagttgccttctggtcccaacagtggcaatgac
aaaagtgatcagagctccatgtcatccagccgcactcagcaaatgcatgcgtttaactgg
atccgaaatcacctagaggaacacccagaaacttctctccccaagcaagaagtctatgat
gaatacaagagctattgtgacaatctcggctaccatccactgagtgcagctgactttgga
aagatcatgaaaaatgtttttccaaacatgaaggcacgtcgtctgggcatgagaggcaaa
tccaagtactgctacagtggactgaggaagaaggcgtttgtccacatgccttctttgccc
aatctggactttcataaaactggagatgggcctgaagggatggagtcctcggggcagctg
cagagtgcagaggaggaggtccggtcagctgcctgcgacctggtctgtgagtgggcacag
aaggtgttgagccgccagttcgatgctgtcgaggacctggcacgcttccttctcaacagc
cattacattggtaccaaatcgatggcagcgctcactgtaatgactggcgcacctactggt
atgaagacaccaacgcagacatcagcgttcgtgccaacagctgaaaccaattcgttccag
ccccaagtaaagactctcccttcaccctctgtggatgccaaacagcagctgcaacgcaag
attcagaagaagcagcaagagcagaagctgcactccccccttccaggagaggcccatggg
aggagggtggatggagggacgccagggccagtcccctgcattcatcgggggagcccagca
ctgctgtcccctcagcccaccatcgggattgtcgtggcagcagtctccagccctgttacg
gtacaaagaaacagacagctggtgacctcacccagccctgttggcacacctgaaggcaaa
gtccttcctgtaaactttcaagtggttgctcagcacatgcattctgtgaagcagtcgccc
aagacccctcaaaacatccccgccagcccaatagatcgctcagcacggcatcgctatccg
caaatactgcccaaaccttgtgccaccagcgccctcaccctgcgttcgcccaccactgtc
ctcatcaccaacagccccatcaagacggttgtgcctacgcctcatgtgagctcggtgaac
gtggtgaaaatgacagcaatatccttgacacccagcaacagtggcactgccctcaggcct
gcttctgccggcaacagtgggacaggggcagctgaggagccaagggcaggcctgcagatc
agacatggttctgtggtctctctccagtctcctgtagcaaggtccaaaagtgtgacgacc
acgcctaccattgagatcaaaatggagcctggagccataactgatgaaagccaagctctc
agcacagaaaggctggctgggactcaggaggcctctggtggccagggagggggttgcgtg
aagctgagggccatcagcgaccccaccactcaggccaagggatccccaggaggaggtggt
gaggcgagacctgaagggacaaggaccaaaggcgatgcaaagtcccttttggacaacact
gtggtgacctccactgtaggcaataataatccaagcactttctttattgcaatctccaat
ccaaacaccagcatgactttatcatccaatggcaatgctgcaagttctcccaaggaaagc
ttggccggttccaagagcccacggaagcgctccacaggtttggcgtctgaatcccaggcc
ccacctatcaagaaagtctttacgtcccagcaatctaccatcagtctggaaagccaaaaa
gtgggcctcagcgctgcagtgaagaaggttacaaaagcaaccctgccagccaaacctgac
tgcacaccagcacctactcctggaaaagttactgtgaaactcaattcaacagtcccaaca
cgaatcttagctcagacgccgtctgacactcaagctgtatattccagcagcttcctgact
gtagtcaaacctcagtcttcacaagacatcaaagttaaacgtgacgaaactccttccagc
atggatacaggtgcaggcccagggattggttctgatcagacgttattgcagcatatcgca
ggtaatcctcctgttgctcctgttaacacgggcatgctggaaaacccgggggttaatgac
ttgcagaaatccatgtgggagtcagtgcagcttggagtcccacaacaggattacactgct
cagctacagagccacaagccccttcaggttccagtggtagatcagcaacaagcactgatc
cagggacagccttccaatcagttatccctgcatccagatatggttgattttgtagcatct
cagccaaatgacaactattttgcttttgatgatgatatcacacaggacagtattgttgaa
gaactagtgttaatggaagagcaaatgaatctgaacaataattcttacaccaattgtttg
gggatgtcactgcagagtcagtcgacagttccccagggggcaatcatgtcatctcatcta
acaggcaaccccttctaccactcagcccacagcagcagcactcctgtccatactcctact
cctacccccacacccaccccaaccccgaccccaacacccacctcagaaatgatgggagga
ggccaggggttatcccgggaaagcccctgctcacaaatggcccagacgacccctgtggat
agtgctttggggagcagccggcacacccccattggcacaccacactccaactgcagcagc
agcgtgccccccagcccagtggaatgcaggaacccctttgctttcacacccataaactcc
agcatagcctaccacgatgccagcatcgtttcgagtagccctgtcaagcccatgcagagg
cccatggccacccacccagacaaggccaagctggaatggatgaacaacgggtacaacagc
gtggtgggaaatgctgccatttcgaacaatggcatcggaattctccccagctatcaggat
ctactggatgaccagttcagaaagccgcatgcctttgccatacctgggcagtcatatccg
acacagacaaggcatcatgacgcacactttggccgcttgacgcccatctctccagtccag
ccccaggtggcttccgtgtctaacctctgcaagcaggaaggttttgcagttcccgctccc
ctggacaacaaaggggcaaactcctctacaagcagcaacttccgctgccgcagtgttagc
cctgctgtccatcgccagcgaaacctaagtggcagcaccgcctaccctgtctccaatctc
cccagatccagcgtcaaccctttcagcagccctgtgactccagaggttctcaacatactc
acaaacagccattcggatggcagtgccaacaacatggctcagaggagtcaatcggttcca
ttaaatgtgatgatgctgacggcggtcccacccatgcagaaacagagcaacaacaagaag
atcaccaacgtgctgctgagcaagatggactcagacagtgatgacgcagtaaggggcctg
gggatcaataacatgccctccaattacacggccaggatgaatctcacacagatcctggaa
accactcccagcttccctagtgccaaccaccagatccaggtcaattccagtccttcggta
tatgaattccagaagccaagttaccttgtgaaaaacagcagaactgaccagatcagcttt
tcttctggggagacccaagcacaatcagatattggagaacaacagcagcagcaactgcag
cagcaacaaaatcaacagcagctagatttcaatagcaccgttaaggacctgttaggagat
gacggcctgaacccaagctcacagcttgtgggccaggtggcgtcagaactcaacgccgtg
gtatcagattttcccagcgatatcaggctgaactctgaactttcaagcagcatcaacgat
ctgaatactttggacacaaatctactgtttgacccgaatcagcagcagggacaatatgaa
gattctacactggaggaactgaaaaatgatccgcttttccaacagatttgcagcgagtca
gtgaactcgaccggttttgactggttggaaagcaaggaccagcctacagttgaaatgctg
ggttaa
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integrated database retrieval system
