Polyodon spathula (Mississippi paddlefish): 121294645
Help
Entry
121294645 CDS
T07273
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121294645 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121294645 (neil1)
Enzymes [BR:
pspa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
121294645 (neil1)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121294645 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
121294645
NCBI-ProteinID:
XP_041074502
LinkDB
All DBs
Position
19:23290628..23296624
Genome browser
AA seq
414 aa
AA seq
DB search
MPEGPELHLASLFVNRVCAGLVFSGPVEKSEVSKNSEVPFTCDAYCITATSRGKEVRLTL
TPIKEEGEPQASPGGKACQPMDIVFRFGMSGFFRFTAGSEIPKHAHLRFYTNETPRRALS
FVDVRRFGSWEPNGDWQTNRGPCIMFEYQSFRANVLSNLSDRAFDKPICEAMLNQKYFNG
IGNYLRAEILYRLKIPPFMKARTVLDGLLPKKRELLEVKPGQGQCQSHQDSEMSLSQKIK
VQMDSQDFLDLCHSVPMEVINLGGKGYDPEKPDDYSMFQAWMQCYCVLGMKSLRDHNGRT
IWFQGEPGPLAPKVSKSPKAKRKGKSRREDKTDKQQGVKEEPPAKGIKKEKGGAQKRVKS
HIESKKMRENERKGSRSSEGRKKKSKPEKDEDAPGTAVPRRQLRRSTRTKSKDN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggaccggagctgcacctggccagtctgtttgtgaaccgcgtctgtgctggg
ttggtgttctctggaccagtagagaaatctgaggtcagtaagaatagcgaggtgcccttc
acatgcgatgcctactgcatcacagcgacctcccggggcaaggaggtccgactgaccctg
acccccatcaaggaggagggggagcctcaggctagtcctgggggtaaggcctgccagccc
atggacattgtcttccggtttgggatgtcaggcttcttccgattcactgctgggagcgag
atccccaagcacgcccacctgcgcttctacaccaatgagacgcctcggagagcgctgagc
ttcgtggatgtcaggcgcttcgggagctgggagcccaacggggactggcagactaacagg
gggccctgcatcatgtttgagtaccagagcttcagggctaacgtgctgtcgaacctgtca
gatcgagcttttgacaagcccatctgtgaagcgatgctgaaccagaaatacttcaatggg
atcggaaactacctgcgagccgagatactgtacaggctaaagatccccccctttatgaag
gcaaggactgtcctggacgggctgctgccaaagaaaagagagctgctggaagtgaaacca
ggacaagggcagtgccagtcgcatcaggattctgagatgagtctgagtcagaagatcaaa
gtgcaaatggacagtcaagactttctcgacctctgtcactctgtgccaatggaggtcatt
aacttgggcggtaagggttacgatcctgagaaaccagatgattactctatgttccaggcc
tggatgcagtgttactgtgtgttagggatgaagtccctgagagatcacaatggcaggacc
atctggttccagggagaacctggtcccttggcaccaaaagtatccaaatctccaaaagca
aagaggaaggggaagagtcggagagaagacaaaactgacaaacagcagggagtcaaagag
gagccaccagcaaagggaattaaaaaagagaagggaggtgcgcagaagagagtgaaaagt
cacattgaaagtaagaagatgagagagaacgagaggaagggctcaaggagtagtgagggg
aggaaaaagaaaagcaaaccggaaaaggatgaggacgctcctgggacggcagtgccaagg
aggcagcttcgaagaagcacgcggaccaagtctaaggacaactaa
DBGET
integrated database retrieval system
