Polyodon spathula (Mississippi paddlefish): 121294651
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Entry
121294651 CDS
T07273
Name
(RefSeq) cytoskeleton-associated protein 5-like isoform X1
KO
K16803
cytoskeleton-associated protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121294651
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121294651
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121294651
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
XMAP215
121294651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XMAP215_CLASP_TOG
CEP104-like_TOG
CLASP_N
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
TAN
Cnd1
HEAT_EZ
HEAT_Maestro
DUF7502
DUF1071
Motif
Other DBs
NCBI-GeneID:
121294651
NCBI-ProteinID:
XP_041074522
LinkDB
All DBs
Position
19:3893568..3920694
Genome browser
AA seq
2063 aa
AA seq
DB search
MADDSEWMKLPIDQKCEHKLWKARLHGYEEALKLFQRIDDEKSPEWSKYLGFIKKFVTDS
NAVAQLKGLEAVLAYVENAHVAGRTTGEVVSGVVCKVFNQPKARAKELGLEICMMYIEIE
KAEAVQEELLKGLDNKNPKIIVMCIETIRKALSEFGSKIVTLKPVVKVLPKLFESREKAV
RDEAKLLAVEMYRWIRDALRPPLQNINSVQFKELEEEWVKLPPSAPKQTRFLRSQQDLKT
KFEQAASSDGVDGDEDEEAPPEVDAYELLEAVEILSKLPKDFYEKIESKKWQERKEALEA
LEILVKNPKIESGDFGDVVRTLKKVIGKDTNVMLVAVAAKCVVGLATGLRKKFGTYACLV
VPTILEKFKEKKPNVVQALQEAIDAVFLTTTLQNISEDVLAVMDNKNPSIKQQSSLFLSR
SFRHCTPSTLPKSLLKPFCAALLKQINDSAPEVRDAAFEALGTALKVVGEKAVNPFLADV
DKLKLDRIKECAEKIELAGGKKVAGGAEKKDVKSATKTAPVAEAPPAKPAAPQKKAPVAK
AGGPPKKGKVAGGAGAKGKKAAVETKDVVETELSDEVCEEKASAVLPSSCMQLLDSGNWK
ERLASMEEFQKAVEQMEKSEMPCQALVRMLAKKPGWKETNFQVMQMKLHIVGLIAVKGNF
SKTSALVVLECLVDKIGDVKCGIKSKEALTAIGEACSLPWTAEHVVSMAFAQKNPKNQAE
TLNWLANAMKEFGFSGINVKAFINNVKTALGATNPAVRTSAIALLGVMFLYMGAPLRMFF
EDEKPALLTQIDAEFEKMQGQTPPAPFRGSIKKEGQDENEEAEEPDDEGGNDVMDLLPRS
DIGEKITSDMVSKMSDKNWKIRKEGLDEVAAVINEAKFIQPNIGELPIALKARLGDSNKI
LLQQTLTILQQIATAMGPNIKQHVKNLGIPIITVLGDSKSNVRAAALTTLNAWVEQTGMK
EWLEGEDLSEELKKENPFLRQEVLGWLAEKLPTLRTVPPDLMLCVPNLYSCLEDRNGDVR
KKAQEALPTFMMHLGYEKMFKATNKLKTASKDQVVSLLEKARTNMPAKPAAPVKAADSKP
AGGVKSAPASAKPQPPPAYDESEVSVPDSKQDPKKAKSAGAAAKGKTTSQSSDANDSMGK
ANTSLSKPNSQSKGKSSKQGVIGKKAPIKSNAKEEEDKSGPIFTHVPNGKEQRIKDEKGL
KVLKWNFTTPRDEYIEQLKTQMSSCSAKWLQDELFHLDFQHHIKALTAMIEHLEDEKDAT
INCLDLVLKWFTLRFFDTNTSVLMKALEYLKMLFTMLSRENYHLNEYEASSFIPYLVLKV
GESKDVVRKDVRALLNMMCKVYPASKVFTFLMDGTKSKNSKQRAECLEELGCLIESYGMN
VCQPTAAKALKEIAVHIGDRDNSVRNAALNTVVVVYNVCGDQVFKLIGNLSEKEMSMLEE
RIKRSAKKPAAAPVKQVEEKPQRSQGGHPNASLMRRPPLDEVPSKLKIMYRTYRIQSRSQ
NAHPEQSFPSIPREFQLDLDIIENDHTRVSEMPDLVQHKLDELLEPVLIPEPKIRAVSPH
FDDMHNSIASTINFVVSQVASGDINTSIQALAQIDEVLRQEDKAEAMSGHIDQFLIATFM
QLRLIYSTHMADERLDKDDIVRLYSCIIGNMISLFQMELLAREASMGVLKDLMHGLITLM
LDSRVEDLEDGQQLIRSVNLLVVRVLEKSDQTNILSALLVLLQDSLLASASSPKFSELVM
KCLWRMVRLLPESVNNINLDRILLDIHNFMKIFPKDKLKQLKSDIPLRTLKTLLHTLCRL
TGPKILDHMTMIENKNESELETHLRRVVKHSLDQTSSKSDRETEKGANGMDELAAKSKVS
DILAEIFKKIGSKENTKEGLTELYEYKQKYSDADIDPFLKNTSQFFQSYVERGLRMIELE
REGKGRVQSSSSGISPQSADTFVPSSTITAPTIPTNGEEVKPAVYLERLKILRQRHGLEN
NSKQHDERPPLTSLLSKPSAPTVASSTDMLHSKLSQLKESREHYHQELESNQSHMQSSMG
TTSSVTNLDDLKKRLERIKSNRK
NT seq
6192 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacagtgaatggatgaagttgcccattgatcagaaatgtgaacacaagctg
tggaaagcaagattgcatggctatgaggaagctctgaagttatttcagaggattgatgat
gaaaaaagtccagaatggtcaaagtaccttggattcataaaaaaatttgtgacggactcc
aatgctgtcgctcagttgaaaggtctggaagcagtacttgcttatgttgaaaatgcgcat
gtggctggaagaactaccggagaggtggtctctggtgttgtatgtaaagtttttaatcag
cccaaagccagggcaaaggaactgggattagaaatctgcatgatgtatatagagatagaa
aaggcagaggcagttcaggaagaactattaaaaggactggataacaaaaatcccaaaatt
attgtaatgtgcatcgaaacaataaggaaagcactaagtgaatttggttcgaaaattgtt
acattgaagccagttgtcaaagtgttgccaaaattgtttgaatctcgagagaaagctgtt
cgagatgaggccaaattgttagcggtggagatgtacaggtggattcgagatgctctgcga
cctccactccagaacattaactctgtacagtttaaagagctggaagaagaatgggtgaag
ttgccaccttcagccccaaaacagacacgattcctccgttcacaacaagatctaaaaacc
aagtttgaacaggcagcaagttcagatggagttgatggggatgaagatgaagaagctccc
ccagaagtggatgcttatgagctcctagaagctgttgagattctttcaaaattgcctaaa
gatttctatgaaaaaattgaatcaaagaaatggcaggaaagaaaagaggctctggaagct
ttagaaatcttagtaaaaaatcctaaaatagaaagtggagactttggggatgtggtcaga
acacttaaaaaggttattggaaaggatacaaatgttatgcttgttgcagtagcagcaaag
tgcgttgttggattggctactgggctgaggaagaaatttgggacatatgcatgccttgtg
gtgccaactattttggaaaaattcaaagagaagaaacctaatgtggtccaggctttgcag
gaggcaattgatgctgtcttccttactactacattgcagaatatttcagaagatgtactg
gctgtgatggacaacaaaaatccttcaatcaaacagcagtcatctttatttctgtcaaga
agctttcgccactgcactccctccacactgccaaaaagtctcttgaaaccattttgtgct
gcactgctgaagcaaattaatgattcagcccctgaggtccgagatgctgcttttgaagca
cttggtactgcattgaaagtggttggagaaaaggctgtgaatccattcctggctgatgtt
gacaagctcaaacttgacaggattaaagaatgtgctgagaagattgagttagctggtgga
aagaaagtggctggtggagcagaaaagaaagatgtgaaatctgccacaaagactgcgcca
gtagctgaggctccacctgcaaaacctgcagcccctcaaaaaaaagctccggtggccaag
gctggtgggccacccaagaaggggaaagtagcaggaggagctggagctaaagggaagaaa
gcagctgttgagactaaagatgtggtggagactgaactttctgatgaggtatgtgaagag
aaagcttcagctgtgcttccttcttcctgtatgcagcttttggacagtggtaactggaag
gaaaggctggctagtatggaggagttccaaaaggcagtagagcagatggagaaaagtgag
atgccctgccaggccctggttcggatgctggcaaagaaaccaggctggaaagagactaac
tttcaggtgatgcagatgaagcttcatattgttggactgattgctgtaaaaggaaacttc
tcaaaaacctctgctctcgttgttctggagtgtttggtcgataaaataggggatgtgaag
tgtggaattaaatccaaagaggcccttactgcgataggagaggcgtgctcgttgccatgg
actgctgaacacgttgtgtcgatggcttttgcacagaagaatccaaaaaatcaagcagag
acattaaactggttggcaaatgcaatgaaagaatttggtttttcagggataaatgtaaag
gcttttattaataatgtcaagactgccctgggtgcaactaatcctgctgtgcgaacttct
gctattgctttgttgggtgtaatgttcctgtacatgggagcccccctacgtatgttcttt
gaggatgaaaaaccagccttgctaactcaaattgatgcagaatttgaaaagatgcaaggt
cagacacccccagctccctttcggggttccatcaagaaggaaggacaggatgaaaatgag
gaggcagaggaaccagatgatgaaggtggaaatgatgtcatggatctcttgccaagatct
gatattggcgaaaaaattacatctgatatggtgtccaagatgagtgataagaactggaag
atcagaaaggagggactggatgaagtagcggctgtgattaatgaggccaaatttattcag
ccaaatatcggagagcttccaatagcactgaaagcgcgccttggggactccaataagatt
ctgctacaacaaacactgacgatactgcaacagatagctacagccatgggccccaatatc
aaacaacatgttaagaatcttgggattcctattattacagtgctgggggacagcaagagt
aatgttcgagctgcagccctcacaacactcaatgcctgggttgaacaaacagggatgaag
gagtggttggaaggagaggatctgtctgaggaactgaagaaggaaaatcccttcttgagg
caggaggttttaggttggctggcagaaaagctgcccacactacgcactgtgcccccagat
ctcatgctatgtgtgcccaacctgtactcctgtctagaagacaggaatggggatgtacga
aagaaagctcaggaagctcttccaacatttatgatgcaccttggatatgaaaaaatgttt
aaggctacaaataaactaaagactgcatcaaaggaccaggtggtgtctttgctagaaaaa
gccaggaccaacatgccagctaagcctgctgcacccgttaaggctgctgactctaaacca
gcagggggtgtaaagtctgcaccagcttctgccaagcctcagcctcctccagcatatgat
gaatctgaagtgagtgttcctgattctaaacaggatcccaagaaagccaaatcagctgga
gctgctgccaaaggaaagacaacttcacagtcttcagatgctaatgacagtatgggaaag
gctaataccagcctctctaaacccaacagccagtcaaaaggaaagtcaagtaaacagggc
gtcattggtaagaaagcaccaatcaaatcaaatgccaaggaagaggaggacaaatctggt
cccattttcacccatgttcccaatggaaaagaacagagaataaaggatgaaaaaggattg
aaggtccttaagtggaactttactactcctcgagatgagtacattgagcagttgaaaact
cagatgtcaagctgttcagcaaagtggctacaggatgagcttttccatttggatttccag
catcacatcaaagctttaacagctatgattgagcacttggaagatgaaaaagatgccact
ataaactgcctggacctggttctgaagtggtttactctgcggttctttgacaccaacacc
agtgtccttatgaaggccttggaatacctgaagatgctctttacaatgttgagcagagag
aactatcaccttaatgaatatgaggcttcttccttcatcccataccttgtactcaaggtt
ggagaatcaaaagatgttgtacgtaaagatgtgcgtgcacttcttaatatgatgtgtaaa
gtctatcctgcaagcaaggttttcaccttcctaatggatgggacaaaatcaaagaactca
aaacagcgagctgaatgtctggaggaactgggctgtttaattgaatcttatgggatgaat
gtttgccagcctacagcagcaaaagcacttaaagaaattgcagttcatattggagatcgg
gacaactctgttcgtaatgccgccctcaacactgtagttgttgtatataacgtctgtgga
gaccaggttttcaaactaataggaaatctttcagaaaaggagatgagtatgttggaagaa
agaattaaacgttctgccaagaaaccagcagctgcacctgttaaacaagtagaggaaaaa
ccacagagatcacaaggaggacatcccaatgccagtttaatgcggaggccacccttggat
gaagtaccttcaaaattaaaaataatgtatcgtacctataggatccaatccagatctcag
aatgcacacccggagcaatcttttccttcaattccaagagagttccagttagaccttgat
atcattgaaaatgaccatactagagtcagtgagatgccagatttggtacagcataaactt
gatgaactcttggagcccgtcttaataccagagcccaagatccgtgcggtctctccccat
tttgatgatatgcacaacagtatagcctccaccataaattttgttgtctcacaggtagct
agtggggacattaacaccagtatccaggccttggcacagatcgatgaggttttgcgacag
gaggataaagcggaagctatgtctgggcacattgatcagttcctgattgcaacatttatg
cagcttcgccttatctacagcacgcacatggctgatgaaagactggacaaagatgacatt
gtcagactttacagctgtattattgggaatatgatttcacttttccagatggaattgctg
gcccgggaggcatcgatgggagtgctgaaagacttgatgcacggattgattactctaatg
ttagattctcgagtggaggacttggaagatgggcagcagctcatcagatctgtcaatttg
cttgttgttagagttttagaaaagtcagatcagaccaacatattaagtgccctccttgtg
ctactacaagacagcctccttgcctctgcaagctctccaaagttttcagaactggtcatg
aagtgtctgtggcgtatggttcgactccttccagagtctgttaataacatcaatctagac
cgaatccttctggacatccacaactttatgaaaatatttccaaaggataagttaaaacaa
ctaaaaagtgatattccactgaggacccttaaaacactgctgcacactctctgcagattg
acaggaccaaagatcttggatcacatgaccatgatagaaaacaagaatgaatcagagctg
gaaactcatcttagacgagttgtgaaacactccttggatcagaccagctcaaagtctgac
agagaaacagaaaaaggagccaatggaatggatgaactggctgctaaatcaaaagtgagt
gacatcctggctgaaatctttaagaagatcggttccaaggaaaacactaaagagggttta
acagagctttatgaatataagcagaaatattcggatgcagatatcgatcccttcttgaaa
aacacctcccagttcttccagagctatgtagaacgaggtctccggatgatagagttggaa
agagagggcaaaggaagagttcagtcctcaagttcaggaattagcccacaaagcgccgat
acatttgtgcctagctcaacaattactgcaccaacaattcctaccaacggagaagaagtt
aaacctgccgtgtatctggagaggttaaagattctccggcagcggcatggcctagaaaac
aattcaaagcagcacgatgagaggccacctcttacgtctttgctttcaaagccgtcggcc
cccacagtcgcttcctcaacagacatgctgcacagtaaactctcacaactaaaggagtcc
cgagaacattaccatcaggaacttgaatctaaccaatcgcacatgcagagcagcatgggt
accacatcctctgtcaccaaccttgatgacttgaaaaagaggctagaaagaataaagagc
aaccgcaaataa
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integrated database retrieval system
