Polyodon spathula (Mississippi paddlefish): 121294695
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Entry
121294695 CDS
T07273
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4-like isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121294695
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
DCC/UNC5 family
121294695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Pur_ac_phosph_N
Ig_2
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
C2-set_2
Ig_5
Ig_PDGFR_d4
Sp38
Ig_C17orf99
DUF7359
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
121294695
NCBI-ProteinID:
XP_041074628
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All DBs
Position
19:31667040..31717022
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AA seq
1267 aa
AA seq
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MALDGLCFLCLASLTLAALLTSQDKAYSLELSCSAGPVHVVLEPAQELMLDCNLPAVEQP
VHISWEKDGVPVVSNGILQVLPNGSLSVLQVVHEGRVQERRSSAEGSYSCTVSSSFGAIA
SRTAVIRDTTLSRFLQHPESQVVQQSGLARFQCRIDGLPTPIITWEKDQSLLPDQARFTP
LPNGVLQIVNVQGEDAGAYRCVAANAARTRYSQDAVLTVTEGPPSGQGDVVIIAAPRNTT
VVAGKTAVMECMAQADPTPFVSWIRQDGKPIATDAVVLSTNLLIADTQSYHAGVYVCRAN
KPKTRQFVNAAAALRVLSPPVITQLPETISRTRASTGRFVCKASGEPAPAITWMKNGQLI
HSNGRVKIQSSGSLVINQIAVEDSGYYQCIAENNLGTACATARLSVIVREGLPSNPHSVS
AATLSSTAVLVTWERPEHNSEQIIGFSLHYQRAAGGTDNVENQFAVNNDTTEFQVKDLEP
NTNYTFYVVAYSPLGASRTSNLVTVHTSEDVPSAPPQLSLLSTTPTDIRVMWFPLSAELS
QGKVTKYRIDYCTVEEVDQIYSIEVAGNETQVPLHSLHPNKTYKVRIAAGTSAGFGDPSE
WTQHRTPDRDNQTMVLFAPLELKVRAKVDSLHVMWQPPSSHAQISGYKLCYREAELENLA
NEDPPDSPRRETWARSPIRLKKKVKQYEITGLAPDRLYEVKVMAFSKHEDGYAAVWKGRT
ERAPLTMGEPPVQKVPPLPPSSVQAVSNSSTSIWLRWEKPSFRTVKIVNYTVRCNPWAVK
NASLVSYYISSEEQILLTGLKPYTKYELAVQSNAVGVDGPFSKVVEQSTLPDRPSSPPSG
LQLSPLGPHSVLVRWQPPLEPNGLIVEYVVLYSSNSTQPDSMWSSLSREGNIFSAEVKGL
ESGTRYFFKMGAKTVMGAGPYSQVKEAHALPEKHSEPDILDIHSVTGIIVGVCLGLLCIL
LCMWVSFRTSKQREIPQGPDLHSSTSPHSLYRKGRPAPITQLECHDCHELETLMSPWPED
TSLPLTGITELTEEHSLMGTSLAEDSLHIELKPAWNGSVSRNWANNITSYRDAITEGSPA
VTNGAVGPPSEPAMERLLQTAASESSKSEVKNKATPLVSTHQMEALVIVHSELSESDRNG
AGPVQYTQGDDGEAMEEEDSDVLLTNQNIADSNEAGRERGSPVLLNHNGKKAGKPELGDS
HGLPNGFHIAEDHNQSLENGDSLQHDNRNCQPAKCQPFPTGPQEHPQQFASSGIINSTST
TDNYLCP
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggacggtctctgctttctctgcctcgcttcgctgaccctcgctgctcttcta
acctctcaagataaagcttattccctggagctgagctgcagcgctggtccggttcatgtt
gttctagaacccgcccaagagctgatgctggactgtaacctgccggctgtggagcagccc
gtccacatctcctgggaaaaggacggtgtgccggtagtgagcaatgggattctgcaggtg
ctgcccaacggctccctctctgtcctgcaggtcgtgcatgagggcagggtccaggagcgc
cggagcagtgctgaggggagctactcctgcaccgtgagcagctcattcggggccatcgcc
agccgcacagccgtcatcagagacaccactctctcccggttcctgcagcaccccgagtct
caagtggtgcagcagagtggcctggcgcggttccagtgcagaattgacgggctcccaacg
ccgatcatcacctgggaaaaagaccagtccctcctccccgaccaagccagattcacccct
ctcccgaacggtgtcctgcagattgtcaatgtgcagggagaggatgcaggggcgtaccgc
tgtgtggcagcaaacgcggctcggactcgctacagccaggacgcagtgctcaccgtcacc
gaaggtcctccgtcggggcagggggacgtggtgatcattgccgcccccagaaacacgacg
gtggtggcggggaagaccgcggtgatggagtgcatggcccaggcagaccccacccccttc
gtgtcctggatccgacaggatggaaagcccattgccaccgatgctgtagttctgtccact
aaccttctgattgctgatacccagtcctaccacgccggggtgtacgtctgtcgagccaac
aagccgaagacccggcagtttgtgaatgctgcagctgcgctgcgagtgctgtctcccccg
gtcattacgcagttgcccgaaaccatctcccggacgcgggcaagcacgggccgcttcgtg
tgcaaggcatctggggagccggcccctgccatcacctggatgaagaatggccagctcatc
cactccaacgggcgggtgaagatccagagctccggcagcctggtaatcaaccagatcgcg
gtggaggactctggatactaccagtgcatcgctgagaacaacctgggcactgcctgcgcc
accgccaggctctcggtcatcgtccgcgaggggcttcccagcaacccccacagcgtgtcg
gccgccaccctgtccagcaccgccgtcctggtgacctgggagcggcccgagcacaacagc
gaacagatcatcggcttctccctgcactaccagagggctgcaggaggcacggacaatgta
gaaaaccaatttgcagtgaacaacgacaccactgagtttcaggtgaaagacttggagccc
aacacgaattataccttctatgtagtggcttattccccgctgggcgccagtcggacatct
aacttggtcactgtccacacctcggaggatgtccccagtgccccgcctcagctgtctctg
ttgagcacgactccgaccgacatccgcgtcatgtggttccccctatccgcagagctgagc
cagggcaaggtgaccaagtacaggatcgactactgcacagtggaggaggtagatcagatc
tattccattgaagtggctggaaacgaaacgcaggtgcccctgcattcactgcatcccaac
aagacttacaaggtgcggattgcagcgggaaccagcgctggcttcggagacccctctgag
tggacacaacaccgaacccccgacagggacaaccagaccatggttctctttgctcccctg
gaactgaaggtcagggccaaggtggactcccttcacgtcatgtggcagccgccgtccagt
cacgcgcagatctctggatacaagctgtgttaccgggaggcggagcttgagaatttagcc
aatgaagatccaccagactctccgagaagggagacctgggccaggtcacccatcaggctg
aaaaagaaagtgaagcagtatgagatcacgggcctagcccctgaccggctctatgaagtg
aaggtcatggccttcagcaagcatgaggatggctatgcggcagtgtggaagggcaggaca
gagagggcaccgctcactatgggagagcccccggtgcagaaggtcccccctcttcccccc
agcagtgtgcaggctgtgtccaacagctccacctccatctggctcaggtgggagaaacca
agcttccgcacggtgaagattgtgaactacactgtgcgctgcaacccctgggccgtcaaa
aacgcctctctagtctcctattacatcagctctgaagagcagatcctcctcactggactc
aagccctacaccaagtatgagctggcagtccagtccaatgcagtgggggtggacggtccc
tttagcaaagtggtggagcagtccactctacccgataggccgtcctctcccccctcaggg
ctgcagctgagccccttgggtccccactctgtgctggtgcgctggcagcccccgctggag
cccaatgggcttattgtggagtatgtggtcctctacagctccaacagcacccagccagac
agcatgtggagctcgctgtcccgagaggggaacatcttcagtgcagaggtcaaggggctg
gaaagcggcaccaggtatttcttcaagatgggtgcaaagacggtgatgggagccgggccc
tattcacaggtgaaggaagcacacgccctcccggagaaacactccgagcctgatatcctg
gatatccactcagtgactgggatcatcgtgggggtctgtctggggctgctgtgcattctg
ctgtgcatgtgggtcagcttccgcaccagcaaacagagagagattccccagggcccagac
ttgcacagctccaccagtccccactctctgtaccgcaagggccggcctgcccccatcacc
cagctggagtgtcacgactgccacgagctcgagacgctgatgtcaccgtggccggaggac
acctccctgccactgaccggaatcactgagcttaccgaggagcacagcctcatgggaacc
agcctggcagaagacagcctccacatcgagctcaagcctgcatggaatgggtcggttagt
cgcaactgggccaataacataaccagctaccgcgacgccatcacagagggatctccggcg
gtgacaaacggggcagtgggtcccccgagcgagccggccatggagaggctgcttcagaca
gcggcttcagagtccagcaagagtgaagtgaagaataaagccacaccattggtgagcacc
catcagatggaagcgctggtcattgtccattcagaactgtcagagtctgacaggaacggg
gcgggccccgtgcagtacacacagggggatgatggggaagccatggaggaagaggatagc
gacgtcctattgaccaatcagaacattgccgacagcaacgaggcaggcagagagaggggc
agccctgtcctgctgaaccacaatgggaagaaggcaggaaagccggagttgggcgattct
cacggccttcccaacggcttccacatcgctgaggaccacaaccagtcactggagaacgga
gactctcttcagcatgacaacaggaactgtcagccagcaaagtgccagcctttccccaca
ggcccacaggagcacccccagcagtttgctagctctggtatcataaactctacctcaaca
accgacaactacttgtgtccgtaa
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