Polyodon spathula (Mississippi paddlefish): 121294696
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Entry
121294696 CDS
T07273
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121294696 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121294696 (efl1)
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
GTPases
121294696 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121294696
NCBI-ProteinID:
XP_041074630
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All DBs
Position
19:complement(30567963..30630050)
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AA seq
1136 aa
AA seq
DB search
MGLTSLEKIVALQKNTSNIRNICILAHVDHGKTTLADCLIASSGIFSSRLAGKLRYMDSR
EDEQIRGITMKSSAISLHFTSDGSDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQAVLRQAWLENIHPVLIINKIDRLILELKLTPLEIYTHLQKILEQVNAVTGSL
FTSKVLEERAEKDADSQASFDNTSGEQVYDWSAGLEETDDSHLYFSPDQGNVVFASAIDG
WGFSVQQFAQLYSKKMGIKAEVLLKTLWGDFYLSAKAKKIMKGAQLKGKKPLFVQFVLEN
IWSLYEAVVIKRDKDKVEKMVSSLGLTIAARDFRHTDPKVLLSAICSQWLPLSHAVLTMV
CSKLPSPLDISAERVEKLMCVGARRFDSLPDQTQDLKRAFMECKSDDSAPVIVFVSKMFA
VDSKTLPQNKQRPLTQEEIAQRRELARQRHAEKFAASQGPDNPEQAATGNTAEAAASIGE
IRKDLLSKQMETMSLKASTPEKEDKEHFVAFARVYSGVVRRGQRMFVLGPKYDPAVVLNK
LPAGCSAADDLPSIPHMACCTLEDLYLLMGRELEQLQDVPSGNVLGIGGLEEFVLKSATL
STSPACPPFTPLNFEATPIVRVAVEPKHPSDMPKLVRGMKLLNQADPCAEVLIQDTGEHV
LVTAGEVHLQRCLDDLRERFAKIEISASEPIIPFRETIIRPPKMDMVNEDMGKQHKVAVI
HQVKGEQSKYCEGFQVDSDGLVTLTTSNKLATLGIRAMPLPEEVTWLLEDSSDLIRTMEQ
FNLNVKEGREALEINQRTLEAIQDLKQKLETHLQGRKWRGAVNHIWTFGPRRCGPNILLN
RLEGYQRPSVWQCLDKHRSEVGVYRDFDNSIVSGFQLATLSGPMCEEPLMGVCFIVEKWD
MKTPQHFAQTHHQDSVEEETTEDLQEQAEGEASNNYKGPPQGAHAQVSPHSNSTAGRYKR
KDDIAVADCYGPFSGQLIAAMKDACRQAFRAKPQRLLAAMYTCEIMATAEVLGRVYGVLS
KREGRVLQEAMKEGTGVFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDP
FWVPTTEEEYLHFGEKADSENQSRKYMNAVRRRKGLCVEEKIVEHAEKQRTLGKNK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggggctcacaagtttggaaaaaatcgttgcactacagaaaaatacatcaaacatcagg
aatatatgcattttagctcacgtggaccatggaaaaacaactttagcagattgccttatc
gccagcagtggcattttttccagtcggttggctggaaagttgagatatatggacagcaga
gaagatgagcagatacgaggaattacaatgaagtccagtgccatatcgctgcattttaca
agtgatggcagtgactacctcatcaacctgatagactctccgggccacgtagacttctct
tcggaggtgtcgacggcagtgcggctgtgcgacggggccatcgtggtggtggatgcggtc
gaaggagtctgtcctcagacacaagcagttttaagacaagcttggctggaaaacatccac
ccagtcttgattataaataaaatagacagactgatattagaactcaaactaactcctcta
gagatctacactcaccttcaaaaaatcttggaacaggtaaatgcagtcactgggtctctt
tttacttccaaagttttagaagagagagccgagaaggatgcagattcccaggcgagtttt
gacaacaccagtggagagcaggtctatgactggagtgcagggctggaggagacagatgat
tcacatctgtacttttcacctgaccaggggaatgtggtttttgccagtgcaatagatggc
tggggttttagcgtacaacaatttgcccagctttatagtaaaaaaatgggcattaaggct
gaagtgctgctcaagacactgtggggagatttttatctcagtgccaaggcaaagaagata
atgaagggagctcagttgaaagggaaaaagcctctctttgttcagttcgtattggagaat
atttggagtttatatgaagcagtggtcatcaaaagggacaaggataaagtggaaaagatg
gtcagttccttaggactcacaattgcagcaagagacttccggcatacagatcctaaagtc
ctcctcagtgctatctgtagtcagtggcttccattgtcacatgctgtgctcactatggtg
tgtagtaagctacctagtcctttagatatatcagccgagagggtggagaagctaatgtgt
gtcggagctaggcggtttgattcccttccagaccaaacgcaggatcttaagagagctttt
atggaatgtaagagtgatgattctgctccagtgattgtgtttgtctccaagatgttcgct
gttgattccaagacactgccacaaaacaaacagaggcctttaactcaagaagaaatcgca
cagcgaagggaactggccaggcaaaggcatgcagagaagtttgcagctagtcaagggcca
gataaccctgaacaagctgctactggcaatacagctgaggctgcagcatccattggggag
atcagaaaagatctactcagtaagcagatggagaccatgagtctgaaagccagcacacca
gagaaagaagacaaggagcattttgttgcttttgccagagtttacagtggagtagtgcgg
agagggcaaaggatgtttgttttgggcccaaagtatgacccggctgtggtcttaaataag
ttgcctgcgggctgttctgctgcagatgatcttccatcaataccccacatggcttgctgt
acactggaggatctctacctgctcatgggtagagaactggagcagctgcaagatgtgccc
tcaggcaatgtgctcggtattggagggctggaggagtttgtattgaagtcggccacgtta
tcaacctctcctgcttgtcctccgtttacaccactgaatttcgaagctactcctattgtg
cgagtggctgtcgaacccaaacatcccagtgacatgcccaagttggttcgagggatgaag
ctgctgaaccaggctgacccctgcgctgaggtactcatacaggatacaggggagcatgtg
ctggtcacggcgggagaggtgcacctccagcgatgcctggacgacctgagagaaagattt
gccaagatagagatcagtgcttcagagcccattattccatttcgagagactataattcga
cctccgaagatggacatggtgaatgaagacatggggaaacagcacaaggttgctgtgata
catcaagtaaagggagaacagtccaagtactgtgaaggattccaggttgattctgatgga
ctggtcacactgactacctcaaacaaattggccacccttggcattagagcaatgccactt
cccgaagaagtgacctggctcttggaggacagcagcgacctcatacgaacaatggagcag
ttcaacttaaatgtgaaggaaggcagggaggctctggagatcaatcagagaaccctagag
gccatccaggacttgaaacagaagctggagacccacctacaagggcggaaatggaggggc
gctgtgaaccacatttggacgttcggtccacgccgatgtgggcctaacattttacttaac
aggttagaaggttaccagagaccgtcagtctggcagtgtttagataaacacagatctgag
gttggagtgtaccgggattttgacaacagcatagttagtgggtttcagttggccacactt
tccggacctatgtgtgaggaacctctaatgggggtctgcttcattgtggagaaatgggac
atgaagacaccccagcactttgcacagacacatcatcaagactccgtggaagaggagacc
actgaggatctgcaggagcaagcggagggagaagccagcaataactataaaggaccacct
cagggtgcacatgctcaagttagtccacactctaatagcaccgctgggcgttacaaacgt
aaagatgacattgccgttgctgactgctacgggcccttctcggggcagctcatagcagcc
atgaaggatgcctgtcgacaggcattccgggctaaaccccagcgcctcctggctgcgatg
tacacctgtgaaatcatggccactgcagaggtactaggtcgggtgtatggtgtcctgtcc
aagagagagggccgagtgctgcaggaggcgatgaaagaaggcacaggcgtgttcattatt
aaggcagtcctgccagtagcggagagctttggctttgcagatgagatcaggaagcggacg
agtggccttgccagtccacagctggtcttcagccactgggaggtgatctccagtgacccg
ttctgggttcccaccacagaggaggagtacttgcactttggtgaaaaggcagactctgaa
aaccagtcacgcaagtacatgaacgcagtacgcaggcgcaaagggctctgtgtggaagaa
aaaatcgtggagcacgcagagaagcaaagaacactaggcaaaaacaagtaa
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