KEGG   Polyodon spathula (Mississippi paddlefish): 121294712
Entry
121294712         CDS       T07273                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121294712
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pspa01009]
    121294712
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pspa03021]
    121294712
Protein phosphatases and associated proteins [BR:pspa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121294712
Transcription machinery [BR:pspa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     121294712
    Little elongation complex (LEC)
     121294712
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing DUF7722
Other DBs
NCBI-GeneID: 121294712
NCBI-ProteinID: XP_041074677
LinkDB
Position
19:33479960..33511778
AA seq 609 aa
MAALREDRRYGLSCGKINKNTPNKTLYHVKLTDTAIRALEAYQNLKGSLPNQPVICFQGN
QGYIKIPAPSSDSPGALRLFSFYLSSDSKDKPQASFDCIHQYVTGLGREQLESQGSIQDK
ITVCATDDSYQMTRERMSQVEKETWSRAAIEIKPGSTYRSKCVKVQKRHGPAPVLDSFPF
RKHSPPSPVLAVKRSSTSSIVPQRTLRDRIIHLLALKPYKKPELILWLEREKANPKDKAD
LAPVLDAVAKVNSKENSYTLKDEYYRHVQRDWPGYTEEEKQVLHRLLLRKLQPTNISQPR
SFQSKQPFHKSSGDSPSHCSPIKNPAVKRPVPSGPPESLANKKQKVLDQNLHQPIANGLR
TPPAAHSTTATVNSSLHVKMEFQRTSNVCESQNGFIPQHSYGDSSVTNKSQEYRDLKPAQ
LNCLLTEYSLKEDEELSGSQHKKKKSKKHKEKERERLKEEGGENAWPERSPELKHNQENL
KERANTPITPSTPAGIPDYLVKYNTITTPEQRQNYKEDFCNEYDEYRDLHARIGSVTEQF
VQLGSKIKTLSPGTQEYKVIEDQIFGEYRNYKKKCPGYREEKKRCKYLHQKLSHIKSLIL
DYDKNHMPL
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggcagccctgagagaggatcgtcgatacgggctctcctgcggaaaaattaataaaaac
accccgaataaaacactttaccacgtcaagctcaccgacaccgcaatcagggcactcgag
gcatatcagaatctcaagggttccttaccaaatcagcctgttatctgcttccagggaaac
caagggtacatcaagatcccagctccttcctcggactcccccggcgctctgcgattgttc
tctttctacctgtccagtgatagcaaagataaacctcaggccagctttgactgcatccac
cagtatgtcactggcctgggtcgagagcagctggaaagccaaggcagtattcaggataag
atcacggtgtgtgccactgatgactcctaccagatgacccgggagcgaatgtcccaggtg
gaaaaggagacgtggagccgggcagctatagaaatcaagccaggatcgacctatcgaagt
aaatgtgttaaagttcagaagaggcacggcccagctccagtgttggacagctttcctttc
cgtaaacactctcctccgagtcccgtgctggctgtgaagaggagcagcacctccagtatt
gtccctcagagaactctccgagaccgcatcattcacctgctggccttgaagccatacaag
aaaccggagctgatcctgtggctggaaagggaaaaagccaacccaaaggacaaagctgac
ctggcccctgtgttagatgcagttgcaaaggtaaactctaaggagaatagctacactctg
aaagatgagtactataggcatgtgcagagggactggcctggctacactgaagaggaaaag
caggttcttcacaggcttctattgaggaagctgcagccaacaaacattagccaacccagg
agtttccagtcaaagcaaccattccacaagtcctctggggattctccttcacactgcagc
cctatcaagaatcctgcagtgaaacgcccagtgccttcaggtcccccggagagtcttgca
aacaagaaacaaaaagtattggatcagaacttgcatcagccaatcgcaaatggacttcgc
acgcctccagccgcacacagtactactgccacagtgaactctagtctacatgtaaaaatg
gaatttcagaggacgagcaatgtttgcgagagccaaaacggcttcattccacagcacagc
tacggcgattccagcgtcacaaacaaaagccaggagtaccgggacctcaagccagcacag
ttgaactgtttactgacggagtactcgctcaaagaggacgaggagctctccggcagccag
cacaaaaagaagaagtccaaaaagcataaagagaaagagagggagaggttgaaagaggag
gggggggagaatgcgtggcctgaaaggagccctgagctcaagcacaatcaggagaatctc
aaagaacgtgcaaatacacccatcactccttccaccccagcaggaatacctgactatttg
gtaaaatataacacaataacaactccagaacagcgtcagaactacaaagaggacttttgc
aacgagtatgatgagtacagggacctccatgcgaggatagggagtgtgactgagcagttt
gtacagctgggatccaaaataaagaccctgtccccggggacacaggaatacaaggttatt
gaagaccaaatatttggggaatacaggaactataagaagaaatgccctggctatcgggaa
gagaagaagcgatgcaagtatttgcaccagaagctgtcgcacattaagagcctaatactt
gactatgacaaaaaccacatgcctttgtaa

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