Polyodon spathula (Mississippi paddlefish): 121294736
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Entry
121294736 CDS
T07273
Name
(RefSeq) pro-interleukin-16-like isoform X1
KO
K22628
interleukin 16
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121294736
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121294736
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Interleukins
121294736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Ezh2_MCSS_fung
SCO2322
Motif
Other DBs
NCBI-GeneID:
121294736
NCBI-ProteinID:
XP_041074716
LinkDB
All DBs
Position
19:30363925..30385183
Genome browser
AA seq
1562 aa
AA seq
DB search
MIPRAANVPACQRASVPACQRVSMPVCQCASLPACQHSSVPVCQCASMPAERLFPLAGQG
RGNLSADMPHSYTNHQKKANGPAVKTERRSATGKINRRSWKLGLISRSLILCNSKNSDEG
LNPEEKYPDSAENKKDGGRERLERNPRVQVVSSTHSAEHKACDPQRTTGEHEDYAKKNMR
RTFSIGESSIWKLCVATGDEGLGIQISANGTSAVPNRGITVSHVMNGGVAHRDGRLHPGE
ELLTVNGQSLTGLSRHEAESVLQAAAGLVDLVVSNKLMTCPVDENKGSLLCNRSTSVSAS
PSTDKENQQPQAIITDKEKAGNDIPPKRDMTGEGSNECNAEKSDNYPQTKLSCKRTQSNS
TSVNPYWIGDLDALIIKTPEMYNSNNTQGNPGFYSNRKALSQQLEFPNASAQVIARPTPS
LSSAHLVNLSSSMQAFVISNIVLMKGQGKGLGFSIVGGKDSMYGPIGIYVKTIFPGGAAA
ADGRLQEGDEILELNGKSLHGLTHDEALKKFKQTKKGLLTLAVRTSLRIGASTSSSGVSH
LCRSRSLSSSATINSRGSCSSPVLADCSFLTSPAKPKDRIMMDITLHKELRVGLGIGLCC
VPSSEGYPGIYIHTLSPGSVAHMDGRLRGGDEIVEINETVVHNMTLNEVYTVLSQCHPGP
VQVIISRHPDPMVSEQQLNEAIAQAVENSKLRKVKGQWSIEALKKNDPCSHGKQKCEKCL
ERSFIQLNNRRSQKVMMRSSSYTSSDHRSPCSNGGSGFSNQQAGMKCRVHSVDVPMTAPQ
STVAGSPGWSVMENNPSPPHQDDYNIPNSKHCSQQSVDFIIKTARVSKPKPPPRRYFKQQ
EDSKEEHFSDHAGVNGDSPNDWKLPTTKCQEAGSLVSEGTKTVHTNTLCVTSLSPGDSGH
FFATARDNTLREKGRNQSVGSPTNLSTGTKRPALRRQAHVDLFVAHHTQDLWVRISNSAE
GQSSCAIMSQENGQPDPNGSSVHEEDAPDEAAAVKDSLNVKKGPPVAPKSVWVRQSLKRL
KSEKQPATTKPQDGSIPDPRSTFGVSLRNTSTKSNLSFKQKINSFETFSSPESTERGTKR
IAPSLSLPLVDKPPSRSDTTSAVNTACHAANKTAEVSPPDESKSAVEVTIPAAEPEVPSS
LPPVSPLPGPRRSSSTKIVPSPALLEPEENVVFKSPSQRTRSFPLATTPSSETCNLKSYD
GESLCKILSFSNQVSHALMRSMRSLPQSPSIWHSNPWSASPGFPQAAPDDDLSWADKTPG
SPAADLSHAEKGFSVSLAELRECTIGMADEKREDGKRERTSSLSSSASAQSLISIIPAEE
IKKMIEEVKALDEETLKQFEDIHVVILHKDEGTGLGFSIAGGIDLENKVTTVHRVFPNGL
ASQEGTIQKGDELLSINGQSLKDMTHSEGTAILRQARMQKQAVIVICKSKESDTGNDESS
ESSLTTVENACVAVAEDVGLDTITVELEKNAGGVGFSLEGGKGSIQGDKPLVINRIFKGG
AAEQSLGIQPGDELLQIQSAALQGLTRFEAWNIIKALPEGPIKAVIRRKTDVSKSEATAE
EQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacgggctgccaatgtgccagcatgccagcgtgccagtgtgccagcatgccag
cgggtcagtatgccagtctgccagtgtgccagtttgccagcgtgccagcattccagcgtg
ccagtctgccaatgtgccagcatgccagcggaacgtctctttccattagctggccagggc
agaggaaatctatcagcagacatgccgcacagctataccaaccaccagaagaaggctaat
gggcctgcggtgaagacggagaggagaagcgctacaggcaaaatcaacaggaggtcatgg
aagcttgggctcatttccaggtctttaatactgtgcaattccaaaaacagcgatgaagga
ttgaaccctgaggaaaaataccctgattcagctgaaaacaagaaagatggtgggagagaa
agattggagagaaaccccagggtacaggtggtgtcctcaacacactctgctgaacacaaa
gcttgtgacccacaaaggaccacaggagaacacgaggactatgccaagaagaatatgagg
agaacattttccattggggaaagcagcatctggaaattgtgtgtggctactggcgatgaa
ggtctggggattcaaatctctgcaaatggcacctctgcagtaccaaacagaggaattact
gttagccatgtgatgaacggaggggtagcacacagagatggtcgacttcatcctggagag
gagctgctgacagtgaatggacaatctctgactggcctctcaagacatgaggctgagtct
gtgctccaggcagcagcagggctagtggatttggttgtttccaacaagttaatgacttgt
cctgtggatgaaaataaagggtcacttttatgtaacagatctacctcggtttctgcatcg
ccatctaccgacaaggaaaaccagcagcctcaggcaatcatcactgataaagaaaaggct
gggaacgacattcctccaaagagagacatgactggggagggatccaatgagtgtaatgca
gaaaaatctgataattatccccagaccaagttgtcttgtaaaaggactcagagtaattct
accagtgtcaatccctattggattggagatttagatgcccttatcattaaaacaccagag
atgtataatagtaacaacacacagggaaatccaggtttctacagcaacaggaaggcactc
tcccagcagctggagtttcctaatgcatctgcccaggttattgcaagacccactccgtct
ttaagctcggcacacttagtaaacttgagcagcagcatgcaagcctttgttatttctaat
atcgttctgatgaagggtcaaggcaagggtttaggtttcagtatagtcggtggaaaggac
agcatgtatggaccaataggaatctatgtcaagactattttcccaggtggagcagcggca
gctgatggaagattacaagaaggagatgaaatactggagttgaatggcaagtcactgcat
ggattgacccacgatgaggccctgaagaaatttaagcaaactaagaagggcttgctgacg
ctggctgtgcggaccagcctgcgaattggagcctcgaccagctcctccggtgtctcccac
ttgtgccgctcgcgctcgctcagctccagcgccaccatcaacagccggggaagctgctcc
agcccagtgctggcagactgcagcttcctaaccagcccagccaagcccaaagacagaatc
atgatggatatcactttgcacaaagaattgcgtgtcggcctggggattgggctgtgctgt
gtcccctccagtgaaggctaccctggtatttacatccacaccctctcccctggctctgtg
gcccacatggatggaagactaaggggtggggatgaaatcgttgaaatcaatgaaacggtg
gttcacaacatgactctcaatgaggtttacacagtcctcagccaatgccacccagggcct
gtccaggttattatcagtcgtcacccggatccgatggtttcagaacagcagctaaacgaa
gccattgcacaagctgttgaaaacagcaaattgagaaaagtcaagggtcagtggagcata
gaagccctgaaaaaaaatgacccatgctcccatggaaagcagaaatgtgaaaaatgtttg
gagagaagcttcattcaactgaacaacaggagatcccagaaggtgatgatgcgctcaagc
agttacacgagctctgaccacagatcaccctgctcgaacgggggctcaggcttctcaaac
cagcaagcaggcatgaaatgcagggtgcacagtgttgacgtgcccatgacagctccacaa
agcactgtggctggatcgccgggctggtcggttatggagaacaacccatcccctcctcac
caagacgattacaacatacctaacagcaaacattgcagccaacaatctgtagacttcatt
atcaaaaccgcaagagtctccaagccaaagcccccaccgaggaggtactttaaacagcaa
gaagattcgaaggaagagcatttttctgaccatgccggtgtgaacggagactcacccaac
gactggaaacttcctactacaaagtgccaggaagcagggagcttggtgtctgaaggaact
aaaacggtccacactaacactctctgcgtgacttcattatcaccaggggactctgggcac
ttctttgcaactgcaagagataacactttacgagaaaaaggaagaaaccaaagtgttggt
tctcctacaaacctctctacgggaactaaaaggccagcattaagaagacaagctcatgtg
gatctctttgtggctcatcatacacaggacctctgggtaaggatttcaaacagtgctgag
ggacaatcaagctgtgccatcatgagtcaggagaatgggcagccggacccgaatggctcc
tccgtgcatgaagaggatgcacctgatgaagctgcagctgtaaaagattccctgaatgtt
aagaaaggtcctccagtggcaccaaagtcggtttgggttcgccagagcctgaaacggtta
aagagcgaaaaacagccagcaacaaccaaacctcaggacgggagcataccagatccaaga
agcacgtttggtgtgagtttaagaaatacttcgaccaaatccaacttgtcattcaaacag
aaaattaactcttttgaaacattctctagccccgaatctaccgaaagaggaactaaaagg
attgctccatcactgtctttacccttggtagacaaacctccaagcagaagtgacacaact
tcagctgtcaacactgcttgtcatgctgccaataaaacagctgaagttagcccacctgat
gaaagcaagtcagcagtagaggtgaccatcccggcagcagagccagaggtaccttccagt
cttccgccagtgtctccattgcccggccccaggagaagcagcagcacaaaaattgtgccc
tcccctgcattgctggaacctgaagaaaacgtggtgttcaagtcccccagccaacggaca
agaagctttccactggctaccaccccgtcctccgaaacctgcaacctgaagtcctatgat
ggagaaagcctctgtaaaattctctcattcagtaatcaagtatcgcatgcgttaatgagg
tcaatgcgttcccttcctcagtccccatccatctggcacagcaacccttggtctgcttct
ccaggattcccccaagcagctcctgatgatgacttgtcctgggccgacaaaacccctggg
tcgcctgctgctgacctgagccatgctgagaagggattttctgtcagcctggcagagctc
agagaatgcacgataggcatggcggacgagaagagagaggacgggaagagggagcgcacc
tcgtccctctcctcctcagcctcggcccaatcactcatttccatcattcctgcagaggag
atcaagaagatgatagaggaggtgaaggctctagatgaagaaacgctgaagcaatttgaa
gacattcatgttgtaattttgcacaaagatgaaggcaccgggctgggattcagtattgct
ggtgggatagaccttgaaaataaagtgaccacagtacaccgggtatttcccaacggactg
gcatcgcaggaaggaaccattcagaaaggggatgagctgttatccattaatgggcagtcc
cttaaagacatgacgcacagcgagggcacagccattctccggcaggcgaggatgcagaag
caggccgtcatcgttatttgcaagtcaaaggagagtgacacaggaaatgacgagagcagt
gaaagcagcttgaccactgttgaaaatgcttgtgtggcagttgcagaggatgtgggtttg
gatacaatcactgttgagctggagaagaatgcagggggtgtggggttcagtttggaagga
ggcaaagggtccattcaaggagacaagccccttgtcatcaacagaatttttaaagggggc
gctgctgaacagagcttggggatccagccgggcgatgagttactgcagatccagagtgct
gccctgcagggactgacccgtttcgaagcctggaacatcattaaagccctaccagagggt
cccatcaaagctgttatcagaagaaaaactgatgtgagcaaatctgaggccacagcagaa
gaacaataa
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integrated database retrieval system
