Polyodon spathula (Mississippi paddlefish): 121294750
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Entry
121294750 CDS
T07273
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121294750
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121294750
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121294750
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
121294750
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121294750
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121294750
Prokaryotic type
121294750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Anticodon_3
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
121294750
NCBI-ProteinID:
XP_041074739
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All DBs
Position
19:complement(10019518..10043399)
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AA seq
821 aa
AA seq
DB search
MAASGEQAFDYDLLLSIREESARLAALNEYLSTRSYVGGFTFSQADVEAFTHFPEPPREQ
YFHVLRWYRHIAAIMDASSCDTTGKRVQPAWSPPEGTEQPRLHLYNSLTRRKDEFVPQNG
KQVLWYCCGPTVYDASHMGHARSYISFDILRRVLMNYFKYDVFYCMNITDIDDKIIKRAR
QNHLFEQYREKKPAPAQVLGDVQTALKPFLVKLAETTDPDKKQMLERLHTAVTSVLGPLQ
EAVQRGAAASEVEPRAELLLEEAKDLLSDWLDSQLGSQVTENSIFSILPKYWEGEYHQDM
EALNILPPDVLTRVSEYVPEIVAFVKKVVENGYGYVSNGSVYFDTALFGSSEKHSYGKLV
PEAVGDQKALQEGEGDLSISADRLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGWHIE
CSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTIAGCKM
SKSLKNFITIKDALAKHTARQLRLAFLMHSWKDTLDYSNNTMESAIQYEKFINEFFLNVK
DILRSPTDITSQYEKWDSQEIELNKSLYEKKAAVHRALCDNVDTRTAMEEMRALVSLGNT
YIGTKKSSRQAPNRMLLQSVAAYLTEMLRVFGAIDGVEPIGFPVGGSGHNMDLEATVMPY
LSVLSDFRETVRKIARENKVTEVLHLCDALRDDTLPELGVRLEDHEGLPTVVKLVDRETL
LKEREEKKQVEEEKKRKKEEAARKKQEQEAAKLAKMKIPPSEMFRSEIDKYSNFDDSGFP
THDAEGKEISKGQTKKLKKLYDAQEKLYKDYLEMIQNGGSS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatctggggaacaggcattcgactatgacttgcttctcagtataagagaggag
tctgccaggctcgcagccctgaacgagtacctgagcactcgcagttacgtcggagggttc
accttctcgcaggcggacgtggaagcattcacacatttccctgagccaccccgagagcag
tacttccacgtgctgaggtggtacagacacatagcggccatcatggatgccagctcatgt
gacacaacgggaaagagggtacagcccgcttggtcccctccagaaggaacagagcagccg
cgactccacctgtacaacagcctgactcgcaggaaggacgagtttgtgcctcagaatggg
aagcaggtgttgtggtactgctgcggacccacagtctacgatgcctctcacatgggacat
gcaagatcttatatatcatttgacatcctgagaagagtcttaatgaattacttcaagtat
gatgtattctactgcatgaacatcacagacatcgatgataagatcattaagagagcccgg
cagaaccacctgtttgagcagtacagagagaagaagccagctcctgcacaggttttggga
gatgtccagactgcattaaagcccttcctggtaaagctggcagaaacgacagaccctgac
aagaagcagatgctcgagcgccttcacacagcagtgacctcagtgctggggcccctgcag
gaggcagtgcagaggggggcagccgccagcgaagtagagcccagggcagagctgttactc
gaagaagccaaggacctgctttctgattggttggattcccaattaggcagtcaggtcacc
gagaactccatcttttccatccttccaaagtactgggaaggggagtaccaccaggatatg
gaagcacttaatatcctgcctccggatgtgctgaccagagtcagtgagtatgtaccagag
attgtggcgtttgtgaaaaaggtggtggagaatggttatgggtatgtctcaaacggttct
gtgtattttgacacagctctgtttggcagcagtgaaaagcactcttatggcaagctggtt
ccagaggctgtaggggaccagaaagcacttcaggaaggggaaggtgacctgagtatctca
gctgacaggctcagtgagaagaggtctcagaatgactttgccctgtggaaggcttcaaaa
cctggggagccatcatgggactccccctggggaaagggacggccaggctggcacatcgaa
tgctctgcgatggctggctccatcttgggagaatccatggacatccatggaggagggttc
gacctccgcttccctcatcatgacaatgagttggcgcagtccgaggcatattttgagaac
gaccactgggtgcgctatttcctgcacacaggtcacctgaccattgctggctgcaagatg
tccaagtctctgaaaaacttcattaccatcaaggatgctctagcgaaacacacagctcga
cagctccgactggcattcctaatgcactcatggaaggacactctagactattccaacaac
actatggagtctgccatccagtacgagaagttcatcaatgagttctttttaaatgtgaag
gatatcctgagatctccaactgacattaccagccagtatgagaagtgggattctcaggaa
attgagctcaacaagagcttgtatgagaagaaggcagcggtacacagggctctgtgtgac
aacgtggacactcgcactgccatggaggagatgagggccctggtgagcctgggaaacacc
tacatcggcaccaagaagagcagcagacaggcccctaacaggatgctgctgcagagcgtg
gcagcctacctcactgagatgctgagggtctttggagctatagatggagtggagcctatt
ggatttcctgtgggaggaagtggacacaatatggatctagaagccactgtgatgccctac
ctgagcgtcctgtcagacttcagggaaacagtgcgaaagatcgcgcgggaaaacaaagtc
acggaggtcctgcatttgtgcgatgctctgcgtgatgacaccctcccagaactcggggtg
cgcctggaggaccacgaaggcctcccgacggtggtaaagctagttgatcgtgaaacgttg
ctgaaggagagggaggagaagaaacaggtggaggaagagaagaagaggaagaaagaagag
gcagcccggaagaaacaagaacaggaagcagcaaaactagcaaagatgaagatcccacca
agtgaaatgttccggtcagaaattgacaagtactcaaacttcgacgacagtggttttccc
acacatgacgcagaaggcaaggagatcagcaaaggacagacaaagaagctgaagaaactg
tatgacgctcaggagaagctttacaaggactacctggagatgattcagaacggagggagc
agctga
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