Polyodon spathula (Mississippi paddlefish): 121294832
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Entry
121294832 CDS
T07273
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121294832
04082 Neuroactive ligand signaling
121294832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121294832
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121294832
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121294832
NCBI-ProteinID:
XP_041074885
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All DBs
Position
2:complement(27992290..28016284)
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AA seq
490 aa
AA seq
DB search
MNSMGKLALFLLFDFMVMKGCLSSKGEDRLFRRLLRRYNQFIRPVENVSDPVIVEFEVSI
SQLVKVDEVNQIMETNLWLRHVWNDYKLRWSPVEYDGIELIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTVTWIPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLQDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTVNL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPVWVRSVFLRILPKMMLMRRPMEEQVVKSS
GRKRKNSISQTSSMNCLEYGENKLPKEQKCLCHHSNDPSEPDSSKLSRQLGPQSINTVLA
FSVVSPEIKQAIESVKYIAENMRSQNKAKEVEDDWKYVAMVIDRIFLWVFVLVCVLGTLG
LFLQPLVGFF
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaatggggaaactcgctttgtttctgctttttgattttatggtaatgaaaggt
tgtttatcatccaaaggtgaagatcgtttgttcaggaggttgctccgccgctacaatcag
tttatcaggccagtagaaaatgtttcagatccagtaatagttgaatttgaagtgtctatt
tcacaactggtcaaggtggatgaagtgaaccagataatggaaaccaatctctggttgcgg
catgtttggaatgactataaattaaggtggagtccagtggaatatgatgggattgaatta
atacgagttccatccaataagatatggcggcctgacattgtgctttacaacaatgctgtt
ggtgactttcttgtagaagacaaaacaaaggctctgttaaaatttgatggcacagtcacc
tggataccacctgctattttcaaaagctcctgcccaatggatattacttatttcccattt
gattatcaaaattgctcaatgaaatttggctcttggacttatgataaagccaaaattgac
cttgtcttaatagggtcaaaagtgaatctgcaagacttttgggagagtggagaatgggaa
atcattgatgcccctggctataagcatgacatcaaatacaactgctgcgaagaaatctac
ccagatattacctattcattctatatccgaagactccctcttttctatactgttaacctg
ataatcccatgccttttaatttcatttttaactgttctagtattttatctcccctcagat
tgtggtgaaaaagttactctgtgcatctctgtcctgctgtctttaactgtgtttttacta
gttatcactgaaacaatcccttcaacttctttagtgattcccctcattggggaatatctc
ttatttacaatgatatttgtgactctttctatcgttataacagtctttgttttgaatgtt
cactatagaacgcccatgacgcacacaatgccagtatgggtaaggtctgtcttcctcagg
attttgcctaaaatgatgctgatgagaagaccaatggaagagcaagtggtcaaatccagt
ggccgaaaaagaaaaaacagcatatcccagacatcatctatgaactgcctcgaatacgga
gaaaataaattaccaaaagaacagaagtgtctttgccaccactccaatgacccctccgaa
cctgattccagtaaattgagcagacagctgggtccacagtccattaatacagtgctggct
ttctcagttgtctctccagagatcaaacaggccattgaaagtgtgaaatacattgcagaa
aacatgagaagccagaataaagcaaaagaggtggaagatgactggaagtatgtggccatg
gtcatcgacaggatttttctctgggtttttgtattagtttgtgttttgggaacgctgggc
ttatttcttcagccacttgttggttttttttaa
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