Polyodon spathula (Mississippi paddlefish): 121294839
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Entry
121294839 CDS
T07273
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121294839
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121294839
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Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_IRO3
bHLH_INO2
bHLH_NCOA
PAS_2
bHLH_NPAS4
PAS_8
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
121294839
NCBI-ProteinID:
XP_041074895
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All DBs
Position
19:5892869..5908000
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AA seq
631 aa
AA seq
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MADQRMDISSTMNDFMSPGPTDLISSSLSTSGMEYTRKRKGSSTDYQLEGFSFEDGVDTD
QDKQLGRECPDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV
LRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSE
SVYKILNYSQNDLIGQSLFDYLHPKDIPKVKEQLSSSDTAPRERLIDAKTGLPVKTDIAP
GPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPT
KMGLDEDNETDNEGCNLSCLVAIGRLHPHIVPQPMNGDIRVKPTEYVSRHAIDGKFVFVD
QRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFI
TLRSRWFSFMNPWTKEVEYIVSTNTVVSGSTLDGADPTFPQLAASPHSMDSVLQAGDGAV
KRALPTVPGIPGGTRAGAGKIGRMIAEEIMEIQRIRGSSPSSCGSSPLNFTSTPPPDTSS
PGGKKIHNGGTPDIPSAALVPGQGQDSIGYPYSDNSLLSDNSHIGIEMIDNDQGSSSPSN
DEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatttcttcaacaatgaatgacttcatgtcaccgggtccc
actgatctgatttccagctccttgagcacctcaggcatggaatacactcgcaagcgaaag
ggaagctctacagactaccaacttgaaggcttttcttttgaagatggcgtggacactgac
caggataaacaacttggacgggagtgcccggatcagcaaggaagaatcaagaatgccaga
gaggcccacagccaaatagaaaagaggcgtcgagataaaatgaacagttttattgatgag
ttggcctccttggtgcctacttgcaatgccatgtcgaggaagctggacaaactcacggtg
ctacgaatggctgttcagcatatgaaaacgctaagaggtgctgcaaatccatacacggaa
gcaaactacaaacctgcattcctatcggatgacgaactgaaacatcttatactgagggca
gcagatggttttctgtttgttgtgggctgtgatcgagggaagatcctgtttgtatcagag
tctgtgtataaaattcttaactacagtcagaatgacctgattggtcagagtttattcgat
tacctgcatcctaaagacattcccaaagtaaaggaacagctttcctcttcagacactgca
ccacgggaaagactcattgatgccaaaactggcctacctgtgaaaacagatattgctcct
ggcccgtctagactgtgttccggagcaagacgctcctttttctgcaggatgaaatgcaac
aggccttcggtaaaagtggaagacaaggatttcccatccacatgttccaaaaagaaagca
gaccgcaaaagcttttgcacaatccatagcactggatatttaaaaagttggcctcctaca
aaaatgggactggatgaagataacgagacagacaatgaaggctgcaacctcagctgcctg
gtagcgatcggacgtttgcatcctcatatagtaccacagccaatgaatggggacatccgt
gtgaaacccacagaatacgtctcgcgccatgcgatagatgggaagtttgtgttcgtagat
caaagggctacagcgatccttgcatatttaccccaagaacttctgggtacatcgttttat
gaatattttcatcaagatgacattggacatcttgcagagtgtcacagacaagttctacag
acacgagaaaaaataacaacaaactgttacaagtttaaaataaaggacgggtcttttatc
acactgagaagtcgttggttcagtttcatgaacccctggaccaaagaagtcgagtatatc
gtttctactaacacagtcgtttcgggtagcacacttgatggggcagaccctacctttccc
cagcttgctgcttcccctcacagtatggacagtgtacttcaagcaggagacggtgcggta
aagagagcccttccgaccgtccctggcattccaggaggtacgagagcaggagctggaaaa
atcggccgcatgatcgctgaggaaatcatggagatacaaaggattagagggtcttcgcca
tccagctgtggttccagtcctctgaacttcaccagcacaccccctccagacacctcctcc
ccaggaggcaagaagattcacaatggtggcactccagatattccatcagctgctcttgta
cctgggcagggccaggattcaataggttatccctattcagacaactcgctgcttagcgat
aactcccatattggtattgaaatgatagacaacgatcaaggctccagcagccctagcaat
gatgaagctgccatggctgttatcatgagtcttttggaagcagatgcaggacttggcggt
cctgtagatttcagtgacttgccatggcccttgtga
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