Polyodon spathula (Mississippi paddlefish): 121294842
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Entry
121294842 CDS
T07273
Name
(RefSeq) protein unc-13 homolog C-like isoform X1
KO
K15293
protein unc-13 A/B/C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121294842
Membrane trafficking [BR:
pspa04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121294842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
FlaC_arch
CENP-F_leu_zip
Sec3_CC
DUF2205
Med9
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
121294842
NCBI-ProteinID:
XP_041074900
LinkDB
All DBs
Position
19:27837941..27944833
Genome browser
AA seq
2233 aa
AA seq
DB search
MVSALLKSIPSYILKLCKGMFTKKLSNTTKKKESSQKKKEQNLTLAGEGRNPVFSTAFKS
TVQKIAKCSSACNLSTEEEEGKKDFSLSPTFSYRVAIANGLKKNLLLANNNERLLQEVLS
IDSSYSGSLSEEKVVCRIDEQKFLTMPVRKNKKSLNSLAPSDGSSEGERTLTTLRLGALR
KLRKLKKSQECVSSDSDVSNWKKTLGIRSKSLDRAGRQQQMQPVEPGFSSTGCISQTHDV
MEMIFKELQGISQIETELSELRGHVNALKDSIDEISSSVEVVQSEIEQLRSGFVQSRRET
RDIHDYIKQINHQGDKLSLRFLNVPEDKKEKTEHVIYQILKDKMGFADARKTLKIELAHR
LGQQRECRNAKPRPIIVFFASPQERDLVLKKCYKLKGTGISVSTDSLAHDARERKDRGMT
SSQTYESMDIKVSVTEKEEQDDWGSLDSDKELEDLNRNKYAILSKTPSKSKTDKKKASAE
SQDSRALDRTADGSTYSNIAQYAGDSCQSSGYKGQDQQTKPCYTDITPGWLSQSDYSTPK
LSRSESDCSKLCHSYSEDFTESQYFSRVNGCSLMSSSDRELWQRKQEYVASSWFASPPSP
NLSQENQSYIEPNEAENTETVDSGVSNGLVCISGDKSHYSDSQLSLQADLSPWKDWHHLE
QGADSGLDASTLQNFVPEVDSSFEPNLTYYPESSMQCQEVDLPYEGENYMTVGSNSSTCP
GFESEPQSQMDAQSDPDPELYASSLYPSQTRSAAMCRSQSEIRSEDEEGPPRSWHSRLSI
DLTDKTFSFPKFGSTLQRAKSALEVVWNKSTQSISASEEVNYPGNTTFMGRIRTLSQSTA
NDSSTTIDSDVYVEPYYYRADDEEYNKQSVDNETDYVEVMEKVLAKLENRTNANEPDEPY
QVYEATNEVNYVLEYDCSYDDDQYEDQYEDQYEDQYENQYEDNDFAGDTPELESLLYEEV
TEEREDENQNITEEAVEIEKPKKRFRPTFKEAAFRAYRKQMAELEEQLLAGDSSALDTQA
RLASGNAFDVSKLVGLQASGGVLYGIDSMPDLRRKRTMPIVRDLALTLTARKAGLSFALV
TRTTLNNEDLKMHVFKKTLQALIYPISSTTPHNFEVWTATTPTYCYECEGLLWGLARQGM
RCTECGVKCHEKCQDLLNADCLQRAAEKSSKHGAEDKTQNIIMAMKERMKIRERNRPEVF
EMIQEMFLISKDDFVQHLKSAKQNVLEGTSKWSAKITITVLCAQGLQAKDKTGSSDPYVT
VQVGKTKRRTKTIFGNLNPVWDEKFHFECHNSTDRIKVRVWDEDDDIKSRVKQHFKKESD
DFLGQTIVEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLKISVEMKGEEKVAPYHVQYTCL
HENLFHYLTEVKNGGVVKIPEVKGDEAWKVYFEDASQEIVDEFAMRYGVEFIYQAMTHFS
CLSSKYMCSGVPAVMSTLLANINAYYARTTATTNVSASDRFSASNFGREKFVKLLDQLHN
SLRIDLSKYRENFPASNPERLQDLKSTVDLLTSITFFRMKVQELQSPPRASVVVKDCVRA
CLDSTYKYIFDNCYDLFNQLVDQTKKQDVPREEQGPSIKNLDFWPNMITLMVTVIDEDRT
AYTPVLNQFPQELNMGKISAEIMWNLFALDMKYAMEEHEKQRLCKSTEYMNLHFKVKWFY
NEYVRDLPAFKDTVPEYSLWFEAFVIQWLDENEDVSMEFLHGALERDKKDGFQPTSEHAL
FSCSVVDVFTQLNQSFDIIKKLECPNPQALAHFMRRFANTINKVLLQYAAIISKCFGAYL
SKEKLPCILMNNIQQLRVQLEKMFESMGGKEDEGTVAFCKLDPEASALLKELQIKLNAVL
DELSIVFGASFQPVIEDCVKQMNQELSQMKGNGAANKSNVAMDAETVLRPLMDLLDKNLT
LFAKICEKTVLKRVLKELWKLVLNTIEKQIVLPPLIDQTGTQLIFNAAKDLGQLSKLKEH
VIREEARSLTPRQCAVMEVVLPTIKQYFHAGGNGLKKAFLEKSPDLKSLRYALSLYTQTT
DALIKKYTSTQHSQGQSSSGSVGEISVQVDLLTHPGTGEHKVTVKIVAVNDLTWQTNTMF
RPFVEVNAVGPNLNDKRRRFGTKTKSNTWSPKYNETFQFILSNEDGPEVYELHFSVKDYC
FAREDRIIGMTVIQLRDLVEKGSCASWYPLVKNISMDETGLTILRILSQRTNDEVAKEFV
RLKSDSRSAEETV
NT seq
6702 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgcccttctcaagagcatcccatcttacatactgaagctttgcaaaggaatg
tttacaaagaaactgtcaaatactacaaagaagaaagagagcagtcagaaaaaaaaggaa
caaaatttgaccctggccggtgagggacgaaatccagtattttccacagcattcaaaagc
acagtccaaaaaattgctaaatgttcatcagcatgcaacctatctactgaagaagaggaa
ggaaaaaaagatttttcactgtctcccacatttagttacagagtagcaatagcaaatggg
cttaaaaaaaatcttctattagctaacaataatgaacgtctgcttcaagaggtcttatct
attgacagcagctattctggctcactgagtgaggaaaaagttgtctgcagaatcgatgaa
cagaaatttttaacaatgccagtaagaaagaacaaaaaaagcctgaacagccttgctccc
tctgatggaagttcagaaggggaacgcaccctgaccacactgcggcttggtgcactgcgc
aagttaagaaaattgaaaaaaagccaagagtgtgtctcttcggattcagatgtaagcaac
tggaagaagacattgggtattaggagcaagtctttagacagagctggtcgacagcaacaa
atgcagccagtggagcctggttttagctccactggctgcatcagtcaaacccacgatgtt
atggaaatgatttttaaggagctccaggggataagtcagatcgaaaccgagctctccgag
ttacgaggacacgtcaatgccctcaaggattctattgacgaaatatccagcagtgtggag
gtcgtgcagagtgagattgaacaattacggtctgggtttgtccagtccagacgagaaacc
agagatatacatgactacatcaaacaaattaatcatcaaggagacaaacttagtttaaga
tttttaaatgtacctgaggacaagaaggaaaaaacagaacatgtcatttaccaaatttta
aaggacaaaatgggttttgcagatgcacgcaagactcttaagattgaacttgcccatcgc
ctgggacaacaaagggaatgtcgcaatgcaaaacctcgtcccatcatcgtgttttttgca
agtccacaagaaagggatttagttttaaagaaatgttataaactgaagggcacaggcata
tctgtctcaactgatagcctggctcatgacgcaagagagagaaaagacagggggatgaca
tcctcacagacatatgaaagcatggacataaaggtatcagttacagagaaagaggagcag
gatgactggggctccttagacagcgataaagagttagaagacctaaatagaaacaaatat
gcaattctctctaagactccaagtaaaagtaaaactgacaaaaaaaaagcaagtgcagag
tcccaagatagcagagctcttgacaggactgctgatggaagtacctattcaaacatagca
caatatgctggtgacagctgtcagtcatctggatataaaggccaggatcagcaaacaaag
ccttgttacactgacattacgcctgggtggctttcacagagcgattactcaacgcccaaa
cttagtcgctcagagtcagattgttcaaaactgtgccattcttactccgaggatttcaca
gaaagccagtattttagtagggtcaatggatgctcacttatgtcatcctcagacagagaa
ctttggcagagaaagcaggaatacgtggcctcatcctggtttgctagcccaccaagtcca
aatttaagtcaggaaaatcagtcttacatagaacccaatgaagctgagaacactgaaact
gtggacagtggtgtcagcaatggactggtgtgtatatcaggggacaaaagtcattatagt
gattctcagctctctttgcaagctgacctttctccctggaaggactggcaccatttagaa
cagggtgcagactcgggtctagacgcttcaaccctgcaaaactttgttccagaggtagac
agctcttttgagcccaatctaacatattacccagaaagtagtatgcaatgtcaggaagtt
gaccttccatatgaaggtgaaaactacatgactgttggaagcaattcttcaacttgtcct
ggctttgaaagcgagccccaaagtcaaatggatgcccagagtgatccagatccagaattg
tatgcaagcagtttatatccaagccaaaccagatctgctgctatgtgtcgaagtcagagc
gagatacgaagtgaagatgaagaaggaccccccaggtcgtggcatagccgactgagtata
gacctcactgataaaacattcagcttccctaaatttggatctactcttcagcgtgctaaa
tcagcattagaagtggtatggaacaaaagcacccaaagtatcagtgcgagtgaggaagtt
aactatcccggcaacactacgttcatgggccggattaggactttgtcccagtctactgct
aatgattctagcacaactattgattctgatgtttacgttgagccttactattacagggca
gatgatgaagaatacaacaaacaatctgttgacaatgaaacggattacgttgaagttatg
gaaaaagtacttgctaaactggaaaacaggacaaatgcaaatgaacctgatgaaccgtac
caggtttatgaagctaccaatgaggttaattatgtgttggaatatgactgcagttatgat
gatgatcaatatgaggatcagtatgaggatcagtatgaggaccaatatgagaaccagtat
gaggacaatgactttgctggtgacactccagagttagaatccttgttatatgaagaagtg
actgaagaaagagaggatgaaaatcaaaatatcacagaggaagccgttgaaatcgaaaaa
cccaaaaagagatttcgaccaaccttcaaagaagctgctttcagggcgtatagaaaacaa
atggctgaactggaagaacagcttcttgcaggagatagcagtgctttggatacacaggca
cggctagcgagtggaaatgcttttgatgtatcaaaactggtggggctccaagcctctggc
ggggtactttatggtattgacagcatgccagatttacgacggaagaggacgatgcctatt
gttcgggacctggctctgactctgactgctcgaaaggcgggtttatcttttgccctggtt
accaggacaactttaaacaatgaagacctgaaaatgcacgtcttcaagaaaacattgcaa
gccttaatttatccaatttcatcaaccacgcctcacaactttgaagtttggacagctaca
actcccacttactgctatgaatgtgaagggcttctgtggggcttagccaggcaaggcatg
cgatgcacagaatgtggagtaaagtgccatgaaaagtgccaagatctgctaaatgctgac
tgtttacagagagctgctgaaaaaagttccaagcatggagcagaagacaaaacacaaaat
atcattatggcaatgaaggagagaatgaaaatcagagagaggaacaggccagaggttttt
gagatgattcaggaaatgtttctaatatcaaaggacgactttgtacagcacttgaaatca
gcaaagcagaacgtattggaaggcacatccaagtggtcagccaaaataaccattacagtg
ctttgtgctcaaggtttacaagccaaggataagacaggctccagcgatccctatgtaaca
gtgcaagttggaaaaactaaaagaaggacaaaaaccatctttggtaatcttaatccagta
tgggatgaaaagtttcattttgaatgccataactccactgacagaataaaggtgagagtc
tgggacgaagacgatgacatcaagtccagagtcaagcagcatttcaaaaaggaatctgat
gattttcttgggcagacaattgtagaagtgagaacgcttagtggggagatggatgtctgg
tacaacctagagaaaagaactgataaatctgcagtgtctggtgccattagattaaaaatc
agcgttgaaatgaaaggagaagagaaagttgctccctaccatgtgcaatatacatgttta
catgagaacttgttccattatttgacagaagtcaaaaatggtggcgttgtaaaaatccca
gaggtgaaaggagacgaggcctggaaggtatactttgaagatgcttctcaagaaattgtt
gatgaatttgcaatgcggtatggtgtagaattcatctaccaggcaatgacgcatttctct
tgcctgtcttccaaatacatgtgctctggagtcccagcagtgatgagtaccttgctggcc
aacatcaacgcgtattatgctcgcactacagctacaactaatgtgtctgcttcagaccgc
ttttctgcctcgaacttcggaagggaaaagtttgtaaaactccttgaccaattgcacaac
tcattgaggattgacctatcaaaataccgggaaaatttccctgccagcaaccctgaaagg
cttcaggatttgaaatcaacagtggacctgcttaccagcatcacctttttcagaatgaag
gttcaggaactccagagcccacccagagccagtgtggtggtgaaagattgtgtgcgagcc
tgtctggactccacatacaaatacatttttgacaactgttacgacctctttaaccaactc
gttgatcagaccaagaaacaagatgttccacgagaggaacagggaccaagcatcaagaat
ttggatttctggcctaacatgattacactaatggtgactgtcattgacgaggacaggaca
gcctacacacctgttctgaaccagttccctcaggagctgaatatgggaaaaatcagtgca
gaaatcatgtggaacctttttgccctggatatgaaatatgcaatggaagagcatgagaag
caacgtctatgcaagagcacagagtacatgaacttgcacttcaaagtgaagtggttttat
aatgaatatgtacgggacctccctgcctttaaggatacagtgccagaatattctttgtgg
tttgaggcctttgtcattcagtggttggatgaaaatgaggatgtttcgatggaatttctc
cacggagcactggagagagacaagaaggatgggttccaaccaacatcggagcatgccctg
ttctcttgctctgtggtggatgtttttacccaactgaatcagagctttgacatcatcaag
aaactggagtgccccaacccccaagctttagcacatttcatgagacggtttgcaaatacc
ataaacaaagtgctactccaatatgctgcaattatatctaaatgttttggagcatatctt
tcaaaggagaaactgccttgcatcctgatgaacaacattcaacaactgagggttcagctg
gaaaagatgtttgagtctatgggcggcaaggaggatgaagggacagttgccttttgtaag
ctcgaccctgaagccagtgctctcctgaaagaattacagataaaactcaatgcagttttg
gatgagttgagcatcgtttttggcgcaagcttccagcctgtaattgaagactgtgtcaag
cagatgaaccaggaattgagtcaaatgaaagggaatggggctgcaaacaaaagcaatgtt
gccatggatgcagaaactgtcctaaggccgctcatggacctgctggataaaaacctcact
ttgtttgctaaaatctgcgagaagaccgtgttgaaaagagttctcaaagaactgtggaaa
ttagttctgaacactatagaaaaacaaattgtactgcctccattaatagaccaaaccgga
acccagctgattttcaatgcagcaaaagatttgggacagctgtccaaactaaaggagcat
gttatccgagaagaggctcgaagcctgactccaaggcagtgtgccgtcatggaagtggtg
ttgcctaccatcaagcaatattttcatgctggaggaaatggactgaaaaaggctttcctg
gaaaagagcccagatttgaagtccctgagatatgctcttagcctttacacacaaactact
gatgccttgatcaagaagtatacctccactcaacactctcaaggtcaatcatccagtgga
tcagtgggtgaaatatctgttcaagtggacctgctgacacacccaggcactggggaacat
aaagtcactgtgaaaattgtggcagtgaatgacctaacctggcaaacaaataccatgttc
cgtccctttgtggaggtgaacgctgttgggcccaacctcaatgacaagaggaggaggttt
ggcacaaagaccaaaagcaacacctggtctccaaagtataacgaaacattccagttcatt
ttgagcaacgaagatggcccagaggtctatgagcttcatttctctgtgaaggattattgc
tttgccagggaagaccgtattataggaatgacagttatccaattaagggacttggtggaa
aagggtagctgtgcatcctggtatcctttagtgaaaaatatctctatggatgaaactgga
ttaaccattctgagaatactctcccagaggaccaatgatgaagtggccaaagaatttgta
cgtctcaagtcagattcacggtctgcagaagaaactgtataa
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integrated database retrieval system
