Polyodon spathula (Mississippi paddlefish): 121294880
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Entry
121294880 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family C member 8-like isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121294880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121294880
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
121294880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
ABC_ATPase
nSTAND1
AAA_23
zf-LSD1
MTABC_N
RsgA_GTPase
TraD_N
Motif
Other DBs
NCBI-GeneID:
121294880
NCBI-ProteinID:
XP_041074963
LinkDB
All DBs
Position
19:complement(7680405..7727445)
Genome browser
AA seq
1593 aa
AA seq
DB search
MVPRYKPSPSSTMSLAFCGNDNNSAAYNVDRGVLNNGCFLDALSIVPHVFLLFITFPILF
IGWGSHSSKVHIHHSTWLQFPGHNLRWILTFILLFVLVCEIAEGIVSDGMESRHLHLYMP
AGLAFMAAVTSIIYYHNIETSNFPKLLLALLFYWILAFIIKTVKFAKFCEHGIWFTQLRF
CITGLLVVLYGMLLAVEINVIRVRRYMCFKHPPEVKPPEDLQDLGVRFLQPFVNLLSKGT
YWWMNTFITSAHKRPIDLKVIGKLPIAMRALTNYVLLRKAFEAQKTKGSSYPQGSKSIWC
AMCHAFGKPLVLSITFRFLADLLGFAGPLCISGIVHHLSKENKTFLPPVKLLGVYFISSQ
EFLANAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMSM
GEMTVGQICNLIAIDTNQLMWFFFLCPNLWAMPVQIVVGVILLYYLLGISALIGATVIAV
LAPVQYFVATKLSQAQKSTLEYSNERLKKTTELLRGIKLLKLYAWEHIFHDSVEETRQKE
MTSLKAFALYTSISIFMNAAIPIAAVLTTFVVHAHLSEDADLSPAVAFASLSLFHILVTP
LFLLSSVVRSTVKALVSVQKLSEFFSSEEIGEEHEYKAAVQLSSGNHTKYQAIPLKVVNR
KRPAREDWSSYSSQREMEKETSEEEDVYIKITNGYFTWMPDGSPTLSNIDIRIPYGQLTM
IVGQVGCGKSSLLLAALGEMQKISGSIYWNSMSDHESEGEDSPIDKDSALDGDVRKRGSV
AYASQKPWLLNATVVENIIFEMPFNKQRYKAVIDACSLQPDIDILPHGDQTQIGERGINL
SGGQRQRISVARALYQQTNMVFLDDPFSALDIHLSDHLMQDGILKMLREDKRTVVLVTHK
LQYLPHADWIIAMKDGTIQREGTLKDIQNSEPELFEHWKTLMNRQDQELEKETIAESKTV
LERKNLRRAMYSREALMKTEEEDEEESIESDDEDNMSSVLRQRAKIPWRACGTYLSSAGI
LLLPLLLLSQLFKHSLMLAIDYWLAKWTSDAISAKINSDKNCTVSQECRFSHSSYSMVFS
ILCCLGIILCLITSVAVEWTGLKVAKELHHSLLNKIILAPMRLFETTPLGSILNRFSADT
NTIDQHIPATLECLSRSTLLCASALAVISYVTPVFLVVLVPLAVACYFIQKYFRVASRDL
QQLDDSTQLPLLSHFSETVEGLTTIRAFRYEAKFKQKLLEYTDANNIASLFLTAANRWLE
VRMEYIGACVVLIAAVASISNSLYNQLSSGLVGLGLTYALMVSNYLNWMVRNLADMEVQL
GAVKRINGLLKIEPENYEGLLSPSQIPTNWPHQGEIQIQNLSVRYDSTLKPVLKHVHAHI
SPRQKVGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSRFSIILQDP
ILFSGTIRFNLDPEGKCTDSMLWEALEIAQLKPVVKALQGGLDAMVTEGGENFSLGQRQL
FCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFSDRTVVTIAHRVHTILNADLV
IVMKRGIILEYDRPEVLLEREDSVFASFVQADK
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagatacaaaccgagtcctagctcgaccatgtccttggcattctgtggcaat
gacaacaattcagctgcatacaatgtagaccggggagtactgaacaacggctgcttcctg
gacgccctcagcatagtgccacatgtattcctgctatttataaccttccctatactattc
atagggtggggcagtcacagttccaaggttcacatacatcacagcacatggctgcaattc
ccaggccataatttaagatggatcctgacatttattctcctgtttgtgctggtgtgtgaa
attgcagagggcatagtgtcggatgggatggagtcccgccacctgcacctctacatgcct
gctggactggcatttatggctgcggttacatcaattatctactaccacaatattgaaacc
tccaacttcccaaagctgctgctagctttgctcttctactggattttagccttcatcata
aaaactgtcaagtttgccaagttctgcgagcatgggatttggttcacccagctgaggttc
tgcatcacaggtctcttggttgtactgtatggaatgctattggcagtggagatcaatgtc
atcagagtgaggcgctacatgtgtttcaaacaccccccggaggtgaagcctcctgaggac
ttgcaggaccttggggtgcgctttctgcagccctttgtgaacctcttatcaaaaggcacc
tactggtggatgaacaccttcatcacttcagcacacaagcggcccatcgacttgaaagtg
atcggcaagcttcccattgccatgagggctctcaccaactacgtgctcctgaggaaggct
tttgaggcacaaaagacaaagggttccagttatcctcagggatcgaagtccatttggtgt
gccatgtgccatgccttcgggaagcccctggtccttagcatcacgttccggtttctagct
gatctgctggggtttgcagggccgctctgcatttctggaattgttcaccatctcagcaag
gagaacaagaccttcctccctccggtgaaattgctcggggtttatttcatttcatcccaa
gagttcctagccaatgcttatgttctggctgtccttttgttctttgcccttctccttcaa
aggacattcctccaggcatcctattatgtggcaatagaaactggaattaacttgagagga
gcaatacagacaaaaatttacaataaaataatgcgcctctgcacttcgaatatgtctatg
ggagagatgacagtggggcagatttgcaatctgattgccatagacacaaaccagctgatg
tggttcttcttcctttgtcctaatctttgggccatgccagtacaaattgttgtgggagtg
atactcctgtactacctcctgggtattagtgccttaattggagcaacagtaattgcagta
cttgcacctgtacagtattttgtggctacaaaactgtcccaagcacaaaaaagcacttta
gagtattccaatgaaagattgaaaaaaaccactgagctcctgcgggggatcaaactcctg
aagctttacgcttgggagcacattttccacgatagtgttgaggagacgcgacaaaaggag
atgaccagtctcaaggcttttgctctttacacctccatttccatcttcatgaatgcagct
atacccattgcagcagtgctgactacgtttgtggtccatgctcacctgtctgaggatgct
gacctctcacctgctgtagcctttgcctcgctctccctgttccacatcttggtcactccc
ctgtttctgctttcaagtgtggtgcgctcaactgtcaaagccctggtcagtgtgcagaaa
ttgagtgagtttttctctagtgaagagattggagaggagcacgagtacaaggccgctgtg
cagctgagctctggcaaccacaccaaataccaggccattcccctaaaagttgttaaccgc
aaacggcctgctcgggaggactggagcagttacagctcccagagagagatggagaaggag
acatcagaggaagaggatgtttatatcaagattacaaatggatatttcacttggatgcct
gatggatctcctacattgtccaatattgatataaggattccttatggccaattgactatg
attgtaggacaggtgggttgtgggaaatcgtctttactcctggcagccctcggagaaatg
cagaagatttctggaagcatttactggaacagcatgtctgatcacgagtcagagggagaa
gacagccccattgacaaggactcagcccttgatggtgatgtaagaaagagaggatctgtg
gcctatgcatcccagaagccctggcttttaaatgcaaccgtggttgagaacatcatcttt
gaaatgcctttcaataaacagagatataaagcagtgattgatgcatgttccctacagcca
gatatcgacattcttccccatggagaccagacacagataggagaaagggggattaatctg
tcaggagggcaacgccaacgcatcagtgtagcgagggccctctaccaacagaccaacatg
gtgtttctggatgatcctttctcggctctcgacatccacctcagtgatcacctcatgcaa
gatgggatcctgaagatgctgagggaagacaagaggacagtagtactggtcacccacaag
ctccagtatcttccacatgcagactggatcattgctatgaaggatggtaccattcagaga
gagggaacactgaaggacattcagaactctgagccagagctgtttgagcactggaagacc
ctgatgaacagacaagaccaggagctggaaaaggagactatagctgaaagcaaaactgtc
ctggagcggaaaaacctgcgcagagccatgtactctagagaggcgctgatgaaaactgag
gaggaggatgaagaggagtcgattgagagcgacgatgaagacaacatgtcgtctgtcctg
cggcagagggccaagatcccctggcgggcctgcgggacatacctgagctcggccggcatc
ctcctgctcccactcctgctgctctcccagcttttcaaacactccctcatgctggccatc
gactactggctcgccaagtggacatcagacgccatttcagccaaaatcaattccgacaag
aactgcactgtcagccaggaatgtagattcagccattcgtcgtactccatggtgttcagc
attctgtgctgcctggggatcatactgtgtctaattacctctgtggctgtggagtggact
ggtctgaaggtagcaaaggaactgcaccacagtttgctgaacaagatcatattggcacca
atgagactatttgagacaaccccacttggaagtattctgaacagattctcagctgatacg
aacaccatagaccagcacatccctgccactctggagtgcctcagtcgctccaccctcctg
tgtgcgtctgcactggctgtcatctcgtacgtgacgccagtgttcctcgtagtgctcgtc
ccactggctgtggcctgttacttcatccagaagtacttcagagtggcgtccagggatctt
caacagttagatgacagcacccagctgcccttactttctcacttctctgagacggtggag
ggactgaccactattcgggcgttcaggtacgaagcaaagtttaaacaaaagctgctggag
tacacagatgccaacaacattgcctctctgtttcttacagcagcaaaccgctggctcgaa
gttcgcatggagtatataggtgcctgtgtggttctcatagcagctgtggcatccatcagc
aactctctctacaaccagctgtcctcaggccttgtgggtctaggccttacatatgcactc
atggtatcaaattatttgaactggatggtgcgcaatcttgcagatatggaggtacagctg
ggagccgtaaaaagaattaatggtctcctgaagatagaacctgaaaattatgaaggcctt
ctttccccatcacagattccaaccaactggccccatcaaggagaaattcaaattcagaac
ctgagtgtccgctacgacagcactctcaaaccagtcctaaaacatgtgcatgcgcacatc
agcccaaggcaaaaggttggaatatgtgggcgaacaggaagtgggaagtcctccttttca
ttagcctttttcaggatggttgacacgtttgaaggacggattatcattgatgggatagac
attgccaaactgcctttacaaacacttagatccaggttttcaattattctccaggatccc
atcttgttcagtggcacaattcgctttaatttggacccagaaggaaaatgcacagacagc
atgctatgggaagccctggaaatagcacagctgaagcctgtggtgaaagcacttcaagga
ggattagatgcaatggtcacagaaggaggggaaaacttcagcctcgggcaacgccagctg
ttctgcttggctagagcatttgtgcggaagagcagcattctgatcatggatgaagccact
gcttctatagacatggccacggaaaacattttacagaaagttgtgatgaccgccttttct
gatcggactgtggttaccatagcacaccgtgtgcacaccatactgaacgcggacctggtc
attgtaatgaagcgagggatcattttggagtacgacaggcctgaggttctgttggaacgg
gaagacagtgtctttgcctcttttgtacaagcagacaaataa
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integrated database retrieval system
