Polyodon spathula (Mississippi paddlefish): 121294925
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Entry
121294925 CDS
T07273
Name
(RefSeq) AP-4 complex subunit epsilon-1-like isoform X1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121294925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121294925
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Others
AP-4 complex
121294925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
INTS1_R4
Coatomer_b_Cpla
Motif
Other DBs
NCBI-GeneID:
121294925
NCBI-ProteinID:
XP_041075067
LinkDB
All DBs
Position
19:complement(27241875..27256920)
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AA seq
1148 aa
AA seq
DB search
MSDVVERTLTALPNLLSLDSQPGTGKLPVTSQLGNLIRNITELTSRHDEEKLIKKELAAI
KEHVSSPNTTLRQMKEVMVRMIYCEMLGYEASFGYIHAIKLAQQGSLLEKRVGYLAVSLF
LNESHELLLLLVNTVLKDLQSTNLIYVCMALTVASQIFPKDMIPAVLPLVEDKLQHSKEI
IRRKAVLALYKFYLIAPNQVQHIHDKFRKALCDKDPDVMAASLHIYGQMIQENPEGYKDL
TESFVTILKQVVGGKLPVDFNYHSVPAPWLQIQLLRILALLGKDDQSTSELMSDVLVESI
RRAEISHNMTYAILFECVKTVYTIYPKSDLLEKAAKCIGKFILSPKINLKYLGLKALTYV
IQQDPNLALQHQMTIIECLDHSDPIIKRETLELLYRITNGQNVTVIVEKMLDFLRQSKDE
YTTIDLAGKVAELAEKYAPDNEWFIQTMNTVLSVGGDVMQPDIPNNFLRLLAEGFENEAE
DHQLRLHAVNSYLSLLQKDNVHFPQRFLQVISWVLGEYFFLKADTKPEVVLDKLGRLLDQ
SSVTSETKGWIMAAITKISSHTVCPNTVAEIAQKYSTCLDTVLRQHAFELKHLNEDRDLI
RRVLPLDASCEDIEVDTSLSFLDGFVADALGRGAAPYKPHHQRQEDLSQEKALHFEPYGL
SLPVSLSSCIITRRQSPTGLSLSSGLSGNNTEMGPKEGSNSLKLEGVRNVWGTEGYLPQK
ETTAEGTLQVLSSHEGPSTQESAVENASLQPDLASPNIPEEDQEKQQLASSLFVGLGSHN
TICLMGKSENTSQRFRRKTNKIQESSNASEKFSDSSISSRSTVESLMDNNILENTNSEQE
TELITLKQSSSKASEFQDSTQPDGLLSGGEQEKLDMPSDPSGLAPSLFTGGDMVILQPSC
AAAKNKQPPATRPPPSLPTELSQLAYSGVQGLCSNESIAVSACKIYKNDSVVLVVFITNQ
STSAIKDIMVRFAPKKLKVSESTSHGFPLLEGQNTANCQCSVLMEKPCAEGALVGSVAYQ
TESEKSSELQFSLAFALADFIRPLTISTEEYGKLWLAFSNDVKQNLKLLSDAKDPLTATL
NALKETLQLHIVDIIGMEGIVACQLLPATPCLLHCRINAGMLAVWLRSPSPDLPDCLLYC
CQKAIQEL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttgttgaaaggacactaactgcccttccgaatctcctgtcgctggattcg
cagcccgggacagggaaacttcctgtcacttcacaattaggaaatcttatccggaatatt
acagaactgacatctagacatgatgaagaaaaactaataaagaaggaactagctgcaatt
aaagaacatgtttcttctcctaacacgacattgagacagatgaaagaagttatggtgaga
atgatctattgtgaaatgttgggatatgaagcttcctttggctatatacacgccattaaa
cttgctcagcaggggagtctcttggaaaaaagagttggctatctggctgtttctttgttt
ttaaatgaaagtcatgagctactacttctccttgtgaacacagtattaaaggatttgcaa
agtaccaaccttatttatgtttgcatggcattaactgttgccagtcagatttttccaaaa
gacatgatcccagcagttctcccactagtagaggacaagctccagcattcaaaagaaata
atcagaaggaaggcagttcttgcactgtacaagttttacctgattgctcctaatcaggtc
cagcacatacatgacaagtttcgaaaagcactgtgcgataaggaccctgatgtcatggct
gcttcgttgcacatttacggacaaatgatccaggaaaacccagaaggctataaagatttg
acagaaagctttgtaactattctaaaacaagttgtaggaggaaaactccctgtggacttc
aattaccacagtgtaccagcaccatggttacagattcaactgcttagaattctggcatta
ctagggaaagacgatcaaagtacaagtgaactcatgtctgatgttttggttgaatctata
agaagagcagaaattagtcacaacatgacgtatgctatattatttgagtgtgtgaagact
gtctatacaatttaccccaaatcagatttactggagaaagcggcaaaatgtattgggaag
tttattttgtcacccaaaattaaccttaagtacctaggattaaaagcactgacctatgta
atccagcaggatcctaacctagctcttcagcatcaaatgacaattattgagtgcttggat
cattctgacccaattatcaagcgagagacactggagctgctgtatcgaataaccaatggc
cagaatgtgacggtcattgtggaaaagatgcttgattttctaaggcaaagtaaagacgaa
tacacaactattgacctggctggaaaagttgcagagctagctgagaagtatgccccagac
aacgagtggttcatccagaccatgaacactgtgctttcagtgggaggtgacgtgatgcaa
cccgatatccccaacaacttcctgaggctacttgcggaaggttttgaaaatgaagctgaa
gaccatcaattaaggctgcatgccgtgaactcctatctttcacttctacagaaagacaat
gttcattttccccagcgttttctacaggttataagctgggttctaggagagtattttttt
cttaaagcagacaccaagccagaagtggtgcttgataaactaggaagattgcttgatcaa
agctctgtcacttctgaaactaaaggctggatcatggctgcaatcacaaagatttcgtct
catacagtgtgtccaaacacagtggctgaaatagcacagaaatacagcacatgtctggat
acagttctgagacaacatgcctttgagctgaagcatctgaatgaggaccgagatctcatc
agaagagttttaccactggatgctagttgtgaagatatagaggtggacacttcactgtct
tttctggatggatttgtggctgatgctttgggtcgcggtgctgctccttataaacctcac
catcaaagacaagaggacctctcacaggagaaagccctgcattttgagccctatggactg
tccttacctgtcagcctgtcatcttgcatcatcactaggagacagtctcctacaggcctc
tcgctaagctctggactgtcggggaacaacacagaaatggggccaaaagaaggatcaaac
agccttaagcttgaaggtgtgaggaatgtgtggggtacagagggctacctgcctcagaag
gaaaccacagcggaaggcaccttgcaggtcttatccagtcatgagggacccagcacccaa
gagagtgctgtggagaatgcatcgctgcagccggacctggcatctccaaacataccagag
gaagaccaggaaaagcagcagctggcatcatcactcttcgtaggactgggatcacacaac
accatctgcctgatgggaaagtctgaaaacacttcacaaaggttcagaaggaaaacaaac
aaaatacaagaatcttcaaatgccagtgagaaattctcagattcctctatttcttcccgg
agtacagtagagagccttatggataataacattttggaaaacactaacagtgagcaagaa
acagaactgataacgctaaaacagtcatcaagcaaagcttctgaatttcaggactccaca
caacctgatggtttattgtctgggggagagcaggagaagctggatatgccttcagatccc
tcagggctggctccttcattgtttacaggtggcgacatggtaatcttacagccctcctgc
gctgctgccaaaaacaaacaacctccagctaccaggccccctccttctctcccaacagaa
ctatctcagctggcttattcaggagttcaaggactttgttctaatgaaagtatagctgtt
tcagcctgtaaaatttacaaaaatgactctgtagtattagttgtttttataacaaatcaa
agcacctcagccattaaagacattatggttagatttgcacctaagaaactgaaggtttct
gaaagcacaagccatgggtttccattgcttgaaggccaaaatacagcaaactgtcagtgc
tctgtcttgatggagaagccctgtgcagaaggagcacttgttggcagcgtcgcttaccag
acagaatctgagaaatcatcagaactacaattttcactcgcctttgcattggcagatttt
atcaggcccctgacaatatccacagaagagtatggcaagctttggctggccttctccaac
gatgtgaagcagaatctcaagttattgtcagatgcaaaggatcctcttactgcaacactg
aatgctttgaaggaaacattacagcttcatattgttgacattataggcatggaaggtata
gtagcatgtcagctgcttccagccaccccctgtctgctgcattgccgaatcaacgctgga
atgttggctgtgtggctccgatccccttcacctgacctccctgactgtttactgtattgc
tgccaaaaggccatacaggaattgtga
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