Polyodon spathula (Mississippi paddlefish): 121294934
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Entry
121294934 CDS
T07273
Name
(RefSeq) sodium/potassium/calcium exchanger 1-like
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
121294934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121294934
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
121294934
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Mucin
DUF913
Fimbrillin_C
PBP1_TM
BUD22
Motif
Other DBs
NCBI-GeneID:
121294934
NCBI-ProteinID:
XP_041075088
LinkDB
All DBs
Position
19:complement(31600018..31617389)
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AA seq
640 aa
AA seq
DB search
MYLHRRKRLQWNRIVFFLTGVLVCFAYQLSFSRRSAPWTRHDDGDNVDSFLDVETRELSN
KTTADDTTDPPQTTTDHTRLTTARTTIRHCIVVDPEPAKTTTIPTTTTPVPNTTVLTNAS
STPLEIPHRTKGEYPEDIFTVQERRKGWVFLHIFGMIYMFVSLAIVCDEFFVPALGVITD
KLAISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCALF
SREMLHLTWWPLFRDVSFYILGLVLLIVFFLDNFIMWWESMMLLGAYVLYVIFMKYNVPV
EHFFKAQLNKHKSIVRVIALEEPGKVSTLTRGGSSASLHNSTMRNTIFQLMIHTLDPLVE
GEDKGDAPDPVNVQVAPPTEPSTSQPAKEEEKKDPPEGNETQEAEGSDDSEDSDEDIDDE
DSEEEEEEEDKEENDKPLSLEWPDNRRKQATYLFLLPIVFPLWLTVPDVRNAASKKFFAM
TFLGSIIWIAVFSYLMVWWAHQVGETVGISEEIMGLTILAAGTSIPDLITSVIVARKGLG
DMAVSSSVGSNIFDITVGLPVPWLMYSLINGFTPVAVSSNGLFCAIVLLFLMLLFVIFSI
AICKWKMNKFLGCTMFALYFFFLVVSVMLEDRIIMCPVSI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcacaggagaaagaggcttcagtggaatcgaattgtctttttcttaacggga
gtgcttgtttgcttcgcctaccagctttcgttcagccggcggtcagcaccttggacaagg
cacgatgacggtgacaatgtggacagctttctcgacgtggaaaccagggagctctcaaac
aaaaccacagctgatgacacgacagacccccctcaaacaacaacagatcacacccggctg
accacagccagaactacaataaggcactgtatagttgtagacccagagccagctaaaacc
accacgatacctactacaacaaccccagtacccaacacaacagtcctaaccaatgcttcc
agcaccccactcgagatcccgcatcgcacgaaaggagaataccctgaggacattttcacg
gtgcaggagcgtcggaaaggctgggtgttccttcatatttttggaatgatctacatgttt
gtgtccctagccattgtgtgcgacgagttcttcgtccctgctttgggggttatcaccgat
aagctggcaatctctgatgatgttgctggtgccactttcatggcagcaggcggctcggct
ccggagctcttcacctcgctcatcggggtcttcatctcgcacagcaatgtcgggatcggc
accatcgtgggctcggcggtgttcaacattctcttcgtcatcggcatgtgcgccctcttc
tcccgggagatgctgcacctgacctggtggcctcttttccgagatgtatccttttatatc
ctcggcctcgtcttgctcatcgttttctttctggacaacttcatcatgtggtgggagagt
atgatgctgctcggcgcttatgtgctttacgtgattttcatgaaatacaacgtgccggtg
gagcacttttttaaagcgcaactcaacaaacacaaaagcattgtcagagttatcgcgctg
gaggaaccaggcaaggtgagtacattgacacggggtggtagctctgcctccctccacaac
agcacgatgcgcaacaccatcttccagctcatgatccacacgctggaccctctggtggaa
ggagaagataaaggggacgcccccgaccctgtgaatgtgcaggtcgcccctcccacagag
ccgtccacatcccagccagccaaagaggaagagaaaaaggaccctcctgaagggaatgag
actcaggaagcggagggctcggacgactcagaagacagcgatgaagatatcgatgatgag
gacagtgaggaagaggaggaggaggaggacaaggaagagaatgacaagcccctgtccctg
gagtggccagacaacaggcgcaagcaggccacctacctcttcctgctgcccattgtcttc
ccgctgtggctgaccgtgcctgacgtccgcaatgcggcctcgaagaagttctttgcaatg
acatttctgggatccatcatctggattgctgtgttctcctacctcatggtgtggtgggcc
caccaggtcggagagacggtcgggatctcggaggagatcatggggctgacgatcctggca
gcgggaacgtccatccctgacctgatcaccagcgtcatcgtggcacgcaagggtctcgga
gacatggccgtgtccagctctgtgggcagcaacatcttcgacatcactgtcggtctgcct
gtgccctggctgatgtactccttaatcaatggcttcaccccagtagcggtgagcagtaac
gggctgttctgcgccatcgtgctgctcttcctcatgctcctcttcgtgatcttctccatc
gccatttgcaagtggaagatgaacaagttcctgggctgcaccatgtttgcactctacttc
ttcttcctggtggtaagcgtcatgctggaggaccgcatcatcatgtgccccgtctccatc
tag
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