Polyodon spathula (Mississippi paddlefish): 121294945
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Entry
121294945 CDS
T07273
Name
(RefSeq) iron-responsive element-binding protein 2-like
KO
K22416
iron-responsive element-binding protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121294945
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121294945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
121294945
NCBI-ProteinID:
XP_041075115
LinkDB
All DBs
Position
19:21824840..21841458
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AA seq
974 aa
AA seq
DB search
MALAVEASEHPFQDLIEILKSEKNEDKKFFSPQKLNDPRYESLPFSIRVLLEAAIRKCDG
FYVKKEDVLNILNWKQQQNNAEVPFSPARILLQDFTGIPALVDFAAMRDAVMRLGGDPYQ
VNPLCPTDLIVDHSLQIDFSKCAIQNAPNPGGGEKQGSAAKSSPAKSQPRSSQCGGQGGC
KGSCNEEPSTKTPGRAAVQIENSPVLCPFHLQPVSEPETALKSQDAEFNRNKERLQFFKW
CSKVFKNVTVIPPETGVVHQVNLEYLSHIVRDDGGFLYPDSVVGTDSHTTMINGLGILGW
GVGGIESEAVMLGQPVSLTLPQVVGCKLVGSISTLATSIDIVLGITKHLRQAGIAGKFVE
FFGPGVSQLSAGDRTTIANMCPEYSATVSFFPVDDVTLKHLKQTNFDEEKLDIIEAYLKA
VKLFRRYQNPSEDPEYSQVIEINLSSIIPHVSGPKRPQDRVAVTDTKKDFQKCLKEKIGF
KGFHIPAEKQNEVIPFMHKGTEYKLAHGSVVVAAVISCTNNCNPSVMLAAGLLAKKAVEA
GLGVQPYIRTSLSPGSGMVTHYISASGVLPYLSQLGFEVIGYGCETCVGNTAPLPEAVVD
AIKQGDLVACGVLSGNRNFEGRLCDCVRANYLASPPLVVAYAIAGTVSIDFETEPLGVNS
EGRAVYLRDIWPTRDELQQAEEQKVIPSMFKQLKDRIEKENKRWNSLEAPESVLFPWDPK
STYIRCPSFFHKLTKEPVCPQSIENAHVLLFLGDVVTTDHISPAGSIARVSAAAKYLISK
RLTPREFNSYGARRGNDAVMTRGTFASIKLYNRFIGKTAPKTVHIPSGQTLDVYEAADRY
QREGIQLIILAGKQYGSGNSRDWAAKGPYLLGVKAVIAESFEKMHKNHLVGIGIAPLQFL
AGENADTLGLSGKEKYTLTIPEDLSPRHELTVKTSTGKTFKVLALFENEMDIAFFKHGGI
LKYVARNILLQQSL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgctgtagaagcttcagagcaccctttccaagatttaattgaaatactcaaa
agtgaaaagaatgaagacaagaagttttttagtcctcagaagcttaatgaccccagatat
gagtccttgcctttttcaatccgtgtgctgcttgaagcagccatccggaagtgtgatggt
ttctatgtaaagaaggaggatgtcttgaacattctcaactggaagcaacagcagaacaat
gcagaagtgcccttctctcctgctcgtattctccttcaggatttcacgggtattccagca
ctggtagattttgctgccatgagagatgcagtgatgagactcggaggggatccttatcag
gttaaccctctgtgcccaactgatctcattgtagaccattcattgcaaatcgacttcagt
aaatgtgcaattcagaatgccccaaaccctggaggaggtgagaagcagggatcagctgcc
aagtcttctcctgccaaatcacagccacgcagctcccagtgtggaggacaggggggctgt
aaaggatcatgtaatgaagagccaagcacaaaaacgccaggaagggctgctgtccagatt
gaaaactcaccagtactctgccctttccatcttcagcctgtgtctgagccagaaacagca
ttaaagagccaagatgctgaattcaacaggaataaagaaaggctacagttttttaagtgg
tgctctaaagtctttaaaaatgtgacggtgataccccctgagactggggttgtgcaccag
gtgaatctagagtacttgtcccacattgtgcgtgatgatggtggctttttgtaccctgat
agtgtggtgggtacagactcgcataccactatgattaacggccttggaatattaggatgg
ggggttggaggtattgaatcagaagctgttatgctgggccagcctgtctctttgacgttg
ccccaggtggttgggtgcaagcttgttggatccataagcacacttgccacatcaatagat
attgtcttgggcattactaagcaccttagacaagcaggaattgctggtaaatttgtggag
ttctttgggccaggggtttcgcagctgtctgccggagacaggactacaattgccaacatg
tgtcctgagtacagtgccactgtgagctttttcccagtcgatgatgttacacttaagcac
ctaaaacagacaaactttgatgaagagaaacttgatataatagaagcctatcttaaagct
gtgaaattgttcagacgttaccagaatccctcagaagatccggaatattcacaggttata
gaaataaatctaagctcaatcattccgcatgtgagcggtcctaagagaccccaggacagg
gtagcagtgactgacacaaagaaggattttcagaagtgcttaaaggaaaagattggtttc
aaggggtttcacattcctgctgaaaaacaaaacgaagttattccttttatgcacaaagga
acagagtataaacttgcccatggttctgttgtagtagctgcagtgatcagctgtacaaac
aactgcaatccatctgtcatgcttgctgcaggtctattagctaaaaaggcagtggaggca
ggcctgggtgttcagccttacataaggacaagtctgtcgcctggaagtggaatggttaca
cactacattagtgccagtggtgttttaccttacctcagtcagctggggttcgaggttatt
ggttatggatgtgaaacctgcgttggaaatactgctcctcttccagaggctgttgtagat
gctattaaacagggtgatttagtagcatgtggagtgctgtctggcaaccggaactttgag
gggcgtctgtgtgactgtgtccgtgccaactacctcgcctcgccaccactagtggtagct
tatgccatagctggcactgttagtatagactttgaaactgaacccttaggtgtaaattca
gaaggcagagcagtgtatttgcgtgatatctggcccacccgtgacgagctacagcaggct
gaagagcagaaggttatcccgtccatgtttaaacaactgaaagatagaatagagaaagaa
aacaaacgatggaatagtcttgaagctccagaatctgttttgttcccatgggaccccaaa
tctacgtatattcggtgtccttcgttttttcataaacttaccaaagagcctgtgtgccct
cagtccatcgagaatgcccatgtcttgctgtttttgggagatgtggttacgacggatcac
atttcacccgctggaagtattgcccgggtcagtgctgctgctaaatacctgataagcaaa
cgactcacacctcgagaattcaactcgtacggagctcggaggggaaacgatgcggtgatg
acacggggtacatttgccagcatcaagttgtacaaccggtttattggaaaaacagcaccg
aaaactgtgcacataccatcagggcaaaccctggacgtgtatgaggcagcagacaggtat
cagagggaggggatccagctgattattctggcaggaaagcagtacggctctggaaactct
cgagattgggctgccaaaggaccttatctactgggtgtaaaggctgtgattgcagagagc
tttgaaaagatgcacaagaaccatctggttgggattgggattgctcctcttcagttcctt
gcaggagaaaatgctgacacattgggactttctggcaaggagaagtacactttaacaatc
cctgaagacctctcaccacgacatgaactgactgtaaagacaagcacaggaaagacattc
aaggttcttgctctttttgaaaatgaaatggacattgcattttttaagcatggagggatc
cttaagtatgtagcgcgcaacatcttgttacaacagtcgctttga
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