KEGG   Polyodon spathula (Mississippi paddlefish): 121294947
Entry
121294947         CDS       T07273                                 
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121294947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121294947
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     121294947
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Vps41 eIF2A Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_DCAF4 NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Nup120_160 PROPPIN Ge1_WD40 Beta-prop_HPS5 Cytochrom_D1 Beta-prop_WDR75_2nd WD40_like WDR54 VPS8_N WD_LRWD1 Beta-prop_VPS8 Vgb_lyase DUF2415 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 121294947
NCBI-ProteinID: XP_041075122
LinkDB
Position
19:21809449..21817958
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGRSEKDGTDTIVTGSLDDSVKVWKWTDEKLELQWSL
EGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLDSGKQIKSMDAGPVDAWTVAFSPDSKY
VATGSHLGKVNIFGVESGKKEFSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
GPDDTHFVSSSSDKSVKVWDTGSRACVHTFFDHQDQVWSVKYNGNGSKVVSAGDDREIHI
YDCPV
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacacagtacagcatacttttcaagcaagaacatgctcatgatgatgctatttgg
actgcggcatgggggaggagtgagaaagatggcaccgacactatagtgacagggtcattg
gatgactctgtaaaagtctggaagtggacagatgagaagctggagttacagtggtctttg
gaaggtcatcagcttggggtggtgtcagtggatataagtcacaatggtgctattgcagcc
tccagttctttagatgcccacatacgtctctgggatctggactctggcaaacagataaag
tcaatggatgcaggaccagtggatgcttggaccgtggccttttctccagattccaagtac
gtggctacaggaagccatctgggaaaagttaacatctttggcgtggagagcgggaagaag
gaattttctttggacactcgagggaaattcatccttagtattgcatatagcccagatggg
aagtatctggccagtggagctatagatggaatcattaatatttttgatattgctactgga
aaacttctccacacgttggaaggtcacgctatgccgattcgatccctgacgttctctcca
gattctcagcttttagtaactgcttcagatgatggttacatcaagatatatgatgtacaa
catgcaaaccttgctgggactttgagtggccatggatcttgggtattaaatgttgcattt
ggtcccgatgacacccactttgtttcaagctcttctgacaagagtgtcaaagtgtgggat
actggatcaagagcatgcgtgcacacattctttgatcatcaagatcaggtgtggagcgtt
aaatacaatggaaatggttccaaggtagtgtctgctggagatgatcgggaaatccacata
tacgactgtccagtttaa

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