Polyodon spathula (Mississippi paddlefish): 121294949
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Entry
121294949 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: kelch-like protein 25
KO
K10462
kelch-like protein 25/37 (ectoderm-neural cortex protein)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121294949
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121294949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_KLHDC2_KLHL20_DRC7
Kelch_6
BACK
Kelch_2
BTB
Kelch_3
Kelch_4
Beta-prop_ATRN-LZTR1
NANM
Kelch_5
BTB_KLHL33
DUF1668
BTB_SANBR
PFU
VP4_helical
Motif
Other DBs
NCBI-GeneID:
121294949
NCBI-ProteinID:
XP_041075127
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Position
19:complement(35062528..35073575)
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AA seq
625 aa
AA seq
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MQAPPHLFTVNACPWVSSFCRLSEIGNRQSTEXTGTMSVSMHENRKSRSSTGSMNISLFH
KPSHPDSVLTHLNTLRKQCMFTDVTLWAGERSFSCHRAVLAACSHYFEAMFSGGLRESLD
SEVNFHDSVHPEVLELLLDFAYSSRVVINEENAESLLEAGDMLQFHDIRDAAAEFLEKNL
HSSNCLGMMLLSDAHQCKRLYELSWRMCLVNFEAVKDTEDFYGLSKDKLLDLILSDELAI
EDEQIVYHAVIRWVRCDLDSRKDHLPELLSVIRLALLPSEYLIETVACEELVLSDKRSRQ
IVEEAVQCKKKILQNDGVVTSTCARPRMAGHTLLILGGQTFMCDKIYQVDHKAKEIIPKS
DLPSPRKEFSACAIGCKVYVTGGRGSENGVSKDVWVYDTVHEEWSKGAPMLIARFGHGSA
ELENCLYVVGGHTAIVGVFPASPSVSLKQVERYDPLTNKWIMMAPLRDGVSNAAVVSAKL
KLFVFGGTTIHRDKASKVQCYDPVENRWAIAAECPQPWRYTAAAVLGSQIFIMGGDTEFT
AVSAYRFDCETNQWTRVGDMTSKRMSCQAVASGNKLYVVGGYFGTQRCKTLDCYDPTSDS
WNTITTVPYSLIPTAFVSTWKHLPA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcccccacatctcttcactgtcaatgcctgcccctgggtcagcagtttctgc
cggcttagtgaaatagggaataggcaatccacggagnggactggaaccatgtctgtcagc
atgcacgagaaccgcaagtcccgctccagcacaggctctatgaacatctccttgttccac
aagccctcgcacccggacagcgtgctcacccacctcaacaccctgcgcaagcagtgcatg
ttcactgacgtcaccctgtgggcgggcgagcgctccttctcctgccaccgcgctgtgctg
gctgcctgcagccactacttcgaggccatgttcagcgggggtctgcgcgagagcctggac
agcgaggtgaacttccacgacagcgtgcaccccgaggtgctggagctgctgctggacttt
gcctactcctcgcgggtcgtcatcaacgaggagaatgcggagtccctactggaggccggt
gacatgctccagttccacgacatccgggatgcagcggctgagttcttggagaagaacctg
cactcctccaactgcctcggcatgatgctgctgtcggacgcccaccagtgcaagcgcctc
tacgagctctcctggaggatgtgcctggtaaactttgaggctgtgaaggacacagaggac
ttctatggactctccaaggacaagctcttggatctcatcctcagtgacgagctggcgatc
gaggatgagcaaatagtctaccatgccgtcatccgctgggtccgctgtgacctggacagc
aggaaagaccacctcccagaactccttagtgtgatccgcctggccctgctgccttctgag
tacctgatcgagacggtggcctgcgaggagctggtgctctcagacaagaggagtcggcag
attgtggaagaggctgtccagtgcaagaagaagatccttcagaatgatggagtggtcacc
agcacctgcgcccgcccccgcatggctggacacaccctgctcatcctggggggccagacc
ttcatgtgcgacaagatctaccaggtggaccacaaggccaaggagatcatccccaagtca
gacctgcccagccccaggaaggagttcagtgcctgtgccattgggtgcaaagtgtacgta
acaggggggcgggggtctgagaatggtgtctccaaggatgtttgggtttatgacacggtt
cacgaagagtggtctaaaggcgcccctatgttgatcgctcgctttggccatggctctgct
gaactggagaactgcttgtatgtcgttggtggacacacagccatagtgggcgtattccct
gcctccccttctgtctctctaaagcaggtggagaggtacgaccccctcaccaataaatgg
ataatgatggcgcccctgagggacggagtaagcaacgcggccgtggtcagcgctaaactg
aaactgtttgtcttcggcggcaccaccatccaccgggacaaagcctccaaggtccagtgc
tacgaccctgtggaaaaccgctgggccatcgcagccgagtgcccccagccctggcgatac
acagccgcagcggtcttaggcagccagatcttcatcatgggcggcgacaccgaattcact
gccgtctctgcctaccgcttcgactgtgagaccaatcagtggacgcgagtcggggacatg
acctccaaacgcatgagctgccaagccgtggcttccggcaacaagctctacgtggtgggg
ggctactttggcacccagcgctgtaagacgttagactgctacgaccctacctctgacagc
tggaatactataaccactgtgccttactccctcattcctactgcgtttgtcagcacctgg
aaacacctgcctgcctga
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