Polyodon spathula (Mississippi paddlefish): 121295107
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Entry
121295107 CDS
T07273
Name
(RefSeq) autophagy-related protein 13-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04136
Autophagy - other
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121295107
04136 Autophagy - other
121295107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121295107
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121295107
Membrane trafficking [BR:
pspa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121295107
Atg1 complex
121295107
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121295107
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
121295107
NCBI-ProteinID:
XP_041075439
LinkDB
All DBs
Position
19:complement(2240270..2250723)
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AA seq
513 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGADWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLDMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGLVGTPV
GTITLSCAYRTNLAFMSSRQFERTAPIMGIIIDHFVDRPFANMGHMHPCNYRTADEDEGV
TYPGVEDSQEVCTTSFSTSPPSQLYSFRLSYHPPALGSADLCYQPVFNTAQPHQMVIPGK
EGGVPQAPVQPSHGTPADHGRMPTCTPSSMARHIPATPSSSREEAETLSQSSEAKSNSPP
DILETTFTRKVGAFVNKPANQVTTACLDLPFAAFAPKNFDMEENDLMVNPPDSPVVESPL
QGSLHSDDSTGSSGPLQDDFVMVDFKPAFSKDDLLPIDLGTFYREFQNPPQLSSLSIDVS
AQSMAEDLDTLPVKLALYEQKIDEFDAFVETLQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgatctgagcccacaggataagaaggacctggataagttcattaagtttttt
gccttaaagaccgtacaggtaattgttcaagctcggcttggtgaaaaaatctgtacacgg
tcctcctcttccccgactggagcagactggttcaatttagcaataaaagacatccccgaa
gttacccatgaagctaagaaggctttggctgggcagcttccaggcattggaaggtccatg
tgtgtggaaatctcccttaaaacctcagagggtgactccatggaactcgaaacatggtgc
ttggatatgaatgaaaagtgtgataaagatatcaaagtgtcatatactgtttataacaga
ctgtcattgctactgaaatccttacttgcaataacaagggtaacaccagcatacaagctg
tccaggaaacaggggcatgattatgtcatactctacaggatctattttggtgaagtgcag
ctcactggactgggtgaaggttttcagactgtacgtgttgggttagttgggactccggtc
ggcaccatcaccttgtcgtgtgcttacaggactaacctggccttcatgtcctccagacag
tttgagcggactgcacccatcatgggcatcataatagatcattttgtggatcgccccttc
gctaacatgggacatatgcatccctgcaactacaggacagcagatgaggatgaaggtgtg
acataccctggtgtggaagattcacaggaggtctgcaccacgtcgttctccacctctccc
ccttcacagctgtacagctttcgtctttcctatcatccgcctgctctcggatcagctgac
ctttgctaccaaccagtctttaacactgcgcaacctcaccagatggttatcccgggtaag
gagggcggagtgccccaggccccagtgcagccctcacatggcaccccggctgaccacgga
agaatgcccacctgtaccccctcgagcatggctcgccacatcccagcaaccccctccagc
agcagggaggaggcggagacattatcccaaagcagtgaggcgaagagcaactctccacca
gacatcctagaaaccaccttcacaaggaaagtgggggccttcgtcaacaagcctgccaac
caggtgaccacagcatgtttggatttaccctttgctgcttttgcaccaaagaactttgac
atggaggaaaacgaccttatggtcaaccctcctgactccccagtggttgagtctccactg
caggggagtttgcattctgacgactcgactgggagcagtgggcctctgcaggacgacttt
gtcatggtggactttaaacctgccttttcaaaggatgatctccttcccatcgacctgggg
acgttttatcgggagtttcagaacccgcctcagctcagcagcctctctattgacgtcagc
gcacagtccatggcagaggacttggacacgctacctgtgaagctggctttgtatgagcaa
aaaattgacgaatttgatgcttttgtagaaaccctgcagtaa
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