Polyodon spathula (Mississippi paddlefish): 121295166
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Entry
121295166 CDS
T07273
Symbol
fga
Name
(RefSeq) fibrinogen alpha chain
KO
K03903
fibrinogen alpha chain
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121295166 (fga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121295166 (fga)
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121295166 (fga)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121295166 (fga)
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121295166 (fga)
Hyaluronan
Extracellular matrix or blood plasma proteins
121295166 (fga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
121295166
NCBI-ProteinID:
XP_041075503
LinkDB
All DBs
Position
2:complement(30037823..30042485)
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AA seq
518 aa
AA seq
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MRQLHLLCCLLAVFSTAWSEEVSFGDIAQGRGPRPVELGHKSQCATEKEWAACTDDDWGF
KCPSGCRVQGLLSQTDRDIAQRIDRIRKFLEENKNRYKSTDQFTKQTYDDIREHLILDSG
NNNKYVNLADQLRRRIVALKLKIDDQLKVLIVLKDKIREQVDTMQALEVDIDIKIRSCKG
SCASAFVYSVNMESYVTLKKQISQIENINFQGVENANSMRIVKMRSLRGDETVSTVYKST
LANEGGDKSIFGNVEQLRLSLETADYEIKQGSPELSTTPAVGSGSVSMGSSSGDKAYAKL
TRITGESTPGSSVSTNTKVVTCTKTIKKRIVYTKDGPVETIEMTGGSPECDHLESLGTDD
AVHSSVKEGKGDSGSFTMKVSGTSGGVDGISDHFPDLHSFFNKHSSSSTSTKEVRGSGGS
SVVTTSTRELPEHSRVKTVVHSGLGRGDGDFEGLGEEDLSAFRTEIVFPGDNQMPDRKGS
SSYSKTTVVSSSSSKGGHFSEQKMRSIRDIQARNLKKR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagttacacctcctctgctgtttgctagctgtcttctctacagcatggtcagag
gaagtttcttttggggacattgcacaaggaagaggaccaaggcctgtagaactgggtcac
aaaagtcagtgtgcaactgaaaaagaatgggctgcctgtacagacgatgactggggtttc
aaatgtccatctggctgtagagtacaggggcttttaagccagacagatcgggatatcgcg
caaagaattgacagaattcgaaaatttctagaggaaaacaagaacagatacaaatcaact
gatcagttcaccaaacaaacctatgatgacataagagaacatctcatcttagattcagga
aacaataataagtatgttaatctggctgatcaattacgtagaagaattgttgctctgaag
ctaaaaattgacgaccagctaaaagtacttatagtactgaaggacaaaatccgagaacaa
gttgatacaatgcaagcacttgaggtggacattgacattaagattcgatcttgcaaaggc
tcatgtgcaagtgcttttgtttacagtgtcaacatggagagttatgtaactctgaaaaaa
caaatatctcagatagaaaacatcaattttcagggagttgaaaatgcgaactccatgaga
atagtcaagatgaggtccttgaggggagatgaaacagtgtccactgtatacaagtccaca
ctggctaatgaaggtggagacaaaagcatattcggaaacgtagagcaactccgactgtcc
ttagaaacagccgactatgagattaaacaaggttcacctgagctctcgaccactccagca
gttgggtcaggtagtgtttccatgggctcttcatctggtgacaaagcctatgccaaacta
accagaatcactggagaatcaaccccaggttcatctgtttctactaacactaaagtggtc
acatgtaccaaaaccatcaaaaagagaattgtctacacaaaagatggtccagtggagacc
attgaaatgacaggtggctccccagaatgtgatcatttagaaagcctgggcactgatgat
gctgtgcattcatctgtcaaagagggaaagggtgacagtggtagctttacaatgaaggtg
tccggtacctcagggggggtagatggcatctccgatcacttccccgacttacattctttc
ttcaacaaacactcaagttcatccacgagcaccaaagaggttcggggaagtggcggctct
tctgtagttaccacctccactagagagcttccggaacactcaagagttaaaacagttgtg
cactctggtttgggcagaggtgacggggattttgagggccttggggaagaggacttgagt
gctttccgcacagaaatagttttccctggtgacaaccaaatgcccgacaggaaaggttcc
tcatcatattcaaagaccactgtagtaagcagtagttcaagtaagggaggtcatttttct
gaacaaaagatgcgtagtattcgagacattcaggcccgtaacctgaagaagagatga
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