Polyodon spathula (Mississippi paddlefish): 121295170
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Entry
121295170 CDS
T07273
Name
(RefSeq) ectodysplasin-A-like isoform X1
KO
K05480
ectodysplasin-A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121295170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121295170
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Tumor necrosis fators
121295170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Collagen
Motif
Other DBs
NCBI-GeneID:
121295170
NCBI-ProteinID:
XP_041075507
LinkDB
All DBs
Position
20:complement(1156175..1201848)
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AA seq
372 aa
AA seq
DB search
MASKSFTEKLANLEHKTLKPELPVTCKCRKQCNNCKIFLGFFALSLWLHLVTLLCYLDLR
SEVKRELLHKNREEFVTLDANDLKEHKSPELEVLDRHYPALLEEDELALSDQFNAADQPR
LPEENKRPLHRTKRSQNRDRDGEGGSNTKTGKGKKKGKKQGPPGAPGPPGPQGPPGPQGP
PGIPGIPGIPGTSAMGPPGPAGPPGPQGQPGLPGPSGAVEKAGARETQPAVVHLQGQGSA
IQVKNDLSGGVLNDWSRISMNPKVFKLHTRSGALEVLVDGTYFIYSQVEVYYINFTDFAS
YEVVVDETPFLQCTRSIETGKTNFNTCYTAGVCMLRARQRIAIKMVHADISINMSKHTTF
FGAIRLGEAPSS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaagagctttacagaaaagttggcaaacttggagcacaaaaccctgaagccc
gaacttcctgtaacctgtaagtgccggaaacaatgtaacaactgcaagatcttcctggga
ttcttcgcgctgtccctctggctgcatctggtcactctgttgtgttatttggatctgagg
tctgaggtgaagcgcgagctgttgcacaagaacagagaggaattcgtcaccctggacgca
aatgacttgaaagagcacaagtctccagaactcgaggttttggaccgtcactaccccgca
ctgctggaagaggacgagctggctctgtcagatcaattcaacgctgctgatcagcctcgt
ctcccagaagaaaacaagagacctcttcaccgaacaaaaagaagtcaaaatagggatagg
gatggggaaggaggttctaatactaaaacaggaaaaggcaaaaaaaaaggcaaaaaacaa
ggccctcctggtgctccgggccctcctggccctcaggggcccccaggaccacaaggccct
ccaggaattccaggaattcccggcatccccggaaccagcgccatggggccacctgggcca
gccgggcctccgggaccacagggccaacccgggcttccaggaccttcaggagcagtagaa
aaagcaggggccagagagacgcagccagcagtggtgcatctgcaaggacaaggatcagca
attcaagtaaagaatgatctttcagggggcgtgctgaatgactggtctcgcatctccatg
aaccccaaggtgttcaagctgcacacgcgcagcggggcgctcgaggtgctggtcgacggg
acctacttcatctatagtcaggtagaagtatactacatcaacttcacagattttgccagc
tatgaggttgtggttgatgagacccccttcttgcagtgcacgcggagcattgagacgggc
aagaccaacttcaacacctgctacaccgctggggtctgcatgctgagggcgaggcagaga
atagccatcaaaatggtccatgcggacatctccatcaacatgagcaagcacacaacattc
ttcggggcgatccggctcggggaggctccgtcatcttaa
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