Polyodon spathula (Mississippi paddlefish): 121295226
Help
Entry
121295226 CDS
T07273
Name
(RefSeq) calnexin-like
KO
K08054
calnexin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121295226
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121295226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121295226
04131 Membrane trafficking [BR:
pspa04131
]
121295226
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pspa04091
]
121295226
Chaperones and folding catalysts [BR:
pspa03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
121295226
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121295226
Autophagy
ER-phagy
Other ER-phagy associated proteins
121295226
Lectins [BR:
pspa04091
]
L-type lectins
121295226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
121295226
NCBI-ProteinID:
XP_041075588
LinkDB
All DBs
Position
20:complement(6995624..7005714)
Genome browser
AA seq
545 aa
AA seq
DB search
MYVLSLFVLSCTSVYSQETPGVAYRPPQPAGDAHFTESFHSSTIEESKWVTSKAKKKDDD
DNEVKYDGLWVLEEPVEQKLPGDKGLVLKSRARLHAIAAPLDRVFHFHDQSLIVQYEVTF
QKGIDCGGAYIKLLSHSNQLDLAQFHDTTPFSIMFGPDKCGEDYKLHFIFRHRNPVTGLY
EEKHAKKPDIDLRDYYTDHKPHLYTLYLYPDNNYEILIDQSVVSKGSLLKDMTPPVTPPR
EIEDPADTKPDEWDDRIHIPDPTVQKPQDWDEDAPPQIPDPAAVRPPGWLVEEQPFIPDP
DSEKPNDWEEEMDGEWEAPKIPNPACKDAVGCGKWTPPLVSNPAHKGSWKPPMIVNPNYQ
GVWKARVIPNPGYFEDPHPFRMDPIGAVGLELWSLTPDLLFDNFLVCSEKSLADHWTVET
WGQKQAAYDADAPGVVLKLFAATEKRPWLWGVYVFTVALPVVLIISFCWPDKRFGPPDQD
YFYKKTDDPQLDDSVDPEEGSKSSARGTQSMGSKDNNGTKTEDIKRPSKADLEVKDQVQS
RRVRF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgctttcgctgttcgtgttatcgtgcacctccgtgtactcgcaggagactcct
ggggtggcctatagacccccacagccagcaggggacgcgcatttcactgaatcgtttcac
tccagcaccattgaggaaagcaaatgggtgacttccaaagcaaaaaaaaaagatgatgat
gacaatgaggtgaaatatgacggactgtgggttttggaggaaccagtggaacagaagcta
cccggggataaaggactagtcctgaaatccagagcgaggctccatgccatagctgcccct
ctggatagagtctttcacttccatgatcaatcactcatagtgcaatatgaggttaccttt
cagaaggggatagactgcggaggggcctacataaagctcctatcccacagcaaccagctc
gatttggctcagttccacgacacaaccccattctccatcatgtttggcccagacaagtgc
ggagaggattacaaactgcacttcatcttccgacacagaaaccctgtgacaggactgtat
gaggagaagcacgctaagaaacctgacattgacctcagagactattacactgaccacaaa
ccacacctgtacactctctatttatacccagacaacaactatgaaatcctaattgaccaa
tcagtggtaagcaaaggcagccttctgaaggacatgacccctcctgtgacccctcccaga
gagattgaggaccctgctgacaccaagcccgacgagtgggacgatcgaatccacatccca
gaccccactgtccagaaaccccaggactgggatgaggacgcgccccctcagatcccagac
cctgcggctgtgagaccccccggctggctggtggaggagcagccgttcatccctgacccc
gattcagagaagccgaacgattgggaggaggagatggatggtgagtgggaagcacctaag
atccctaaccctgcctgcaaggacgctgttggctgtgggaaatggactccgcctctagtc
tccaaccctgcccacaagggcagctggaagccgccaatgattgtcaatccgaattaccag
ggtgtgtggaaggcccgagtgattccaaaccccggttattttgaggacccccaccccttt
cgcatggaccctatcggggctgtgggtctggagctctggtccctgactcctgacctcctg
tttgataacttcctggtgtgctctgagaagagcctggcggatcactggactgtagagacc
tgggggcagaagcaggcagcgtatgatgcagatgcgccgggtgttgtgttgaagctcttt
gcagccacagagaagcggccctggctttggggggtgtacgtattcacagtagctctgcct
gtcgtcttgatcatcagcttttgctggccagacaagaggtttggtcctcctgatcaggac
tatttctataagaaaacagatgatccacagctggatgattctgtggatccggaggagggc
tccaagtcttcagcccggggcacacaatcaatgggaagtaaagataataatggaactaaa
acagaggacatcaagagaccatcaaaagcagacctggaagtaaaagaccaggttcagtct
agaagagtaaggttctga
DBGET
integrated database retrieval system
